Nocardioides mesophilus: H9L09_09975
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Entry
H9L09_09975 CDS
T07004
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nmes
Nocardioides mesophilus
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmes03016
]
H9L09_09975 (thpR)
Enzymes [BR:
nmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
H9L09_09975 (thpR)
Transfer RNA biogenesis [BR:
nmes03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
H9L09_09975 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QNN54594
UniProt:
A0A7G9RG69
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All DBs
Position
2100464..2101060
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AA seq
198 aa
AA seq
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MRMFVALPLSEAAVEHLQEFLAPRQEAGADLRWTVTEQWHLTLAFLPDVADRHLDELEER
LTRAARRRTAVEVALAGGGAFPGPSRGRVLFAAVDAGERTGSRAEELRRMATGARAAAVK
SGIEVEGARFHPHVTLARARRPTEMTRWIRVLEGYRGPTWCTERLVLVESHLGEGPRRRP
RYEIRADFPLGAGAETRA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatgttcgtggcgctgccgctctccgaggcggcggtcgagcacctccaggagttc
ctggccccgcgccaggaggccggcgccgacctgcgttggaccgtgaccgagcagtggcac
ctgacgctggcgttcctgcccgacgtcgccgatcggcacctcgacgagctcgaggagcgg
ctgacccgggcggcgcgccgccgtaccgcggtcgaggtggcgctcgccggaggcggtgcc
ttccccggcccgtcgcgcgggcgggtgctcttcgccgccgtcgacgcgggggagcggacc
gggagccgggccgaggagctgcgccggatggcgaccggggcgcgggccgccgccgtgaag
tccggcatcgaggtcgagggcgcccggttccacccgcacgtcacgctggcccgggccagg
cgtccgaccgagatgacccgctggatccgggtgctggagggctaccgcggacccacctgg
tgcaccgagcgcctggtgctggtcgagtcccacctgggggaggggccgcggcggcgtccc
cgctacgagatccgggcggacttcccgctgggggccggcgccgaaacgcgggcgtaa
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