Nocardioides mesophilus: H9L09_10465
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Entry
H9L09_10465 CDS
T07004
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nmes
Nocardioides mesophilus
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmes03032
]
H9L09_10465 (topA)
03400 DNA repair and recombination proteins [BR:
nmes03400
]
H9L09_10465 (topA)
Enzymes [BR:
nmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L09_10465 (topA)
DNA replication proteins [BR:
nmes03032
]
Prokaryotic type
DNA Topoisomerases
H9L09_10465 (topA)
DNA repair and recombination proteins [BR:
nmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L09_10465 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QNN54676
UniProt:
A0A7G9RGF1
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All DBs
Position
2184647..2187334
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AA seq
895 aa
AA seq
DB search
MAGKNGTGSKLVIVESPAKAKTIAGYLGNGYVVESSIGHIRDLPQSAADVPAKIKGEPWA
RLGVDVDHDFTPYYVVSRDKKSHMTKLKGLLKDADELFLATDEDREGEAIAWHLLDELKP
KVPVHRMVFHEITKPAILAAVENPRQIDMDLVEAQEARRILDRLYGYEVSPVLWKKVMSG
LSAGRVQSVATRLVVDKERERMAFRSASYWDLEGTFDAGAKHEDRMFPAKLHSVDGARVA
RGSDFTQQGVLKDGSNVVHLDRNRAQALAGALEEATFEIRSVEAKPYTRRPYAPFRTTTL
QQEASRKLGFGASRTMQVAQRLYENGFITYMRTDSTTLSESAVAAAREQARELYGAEYVP
DKPRTYASKVKNAQEAHEAIRPAGESFRTPAQTGLTGEQFRLYELIWMRTVASQMKDAEG
RSVTVRLGGGAATGEDVVFSASGRVLTFHGFLKAYVEGRDDEGDPEGGGPDDRETRLPAV
AEGDAVTAATLQAAGHETKPPARYTEATLVRELEEREIGRPSTYASIIGTILNRGYVYKK
GTALVPAWLAFSVIRLLEEHFSRLVSYEFTASMEDVLDEIAGGRRDRNSELAAFYFGDAD
VEGLKKLVGELGDIDARELATFPIVDGIDLRVGRYGPYIETPDGTRANVPEDLPPDELTE
AKARELLENPAGEEARLGQDPESGLEIVAKNGRFGPYVTEVLPEDAPKSRRPRTSSLFKS
MNLDTITLDDALRLLTLPRVVGADPESGDEITAQNGRYGPYLKKGTDSRSIDAEEKLLTI
TLEEALAIYAQPKQRGRAAADPGRELGDDPVSGAKVTVKSGRFGHYVTDGEYNATLRDGD
DEKTVTLERAAELLAERRAKGPAKKAAKKGAKKAAKKSPAKKTAKKAAVKKTAAK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggcaagaacggaaccgggagcaagctcgtcatcgtcgagtcgccggccaaggcg
aagacgatcgcgggctacctcggcaacggctacgtggtcgagtcgagcatcgggcacatc
cgcgacctgccgcagagcgccgcggacgtcccggccaagatcaagggcgagccgtgggcc
cggctcggggtcgacgtcgaccacgacttcaccccctactacgtggtctcccgcgacaag
aagtcgcacatgaccaagctcaagggcctgctcaaggacgccgacgagctcttcctcgcc
accgacgaggaccgcgagggcgaggccatcgcctggcacctcctcgacgagctgaagccc
aaggtgccggtgcaccggatggtcttccacgagatcaccaagcccgccatcctggccgcg
gtcgagaacccccgccagatcgacatggacctcgtcgaggcgcaggaggcccgccggatc
ctggaccgcctgtacggctacgaggtctccccggtgctgtggaagaaggtcatgtccggc
ctctccgcgggccgggtccagtccgtggccacccggctggtcgtggacaaggagcgcgag
cggatggcgttccgcagcgcgtcctactgggacctcgagggcaccttcgacgccggcgcc
aagcacgaggaccggatgttcccggccaagctgcactcggtcgacggcgcccgcgtggcc
cgcgggtccgacttcacccagcagggcgtgctcaaggacggcagcaacgtcgtgcacctc
gaccgcaaccgggcgcaggccctggccggggcgctcgaggaggccaccttcgagatccgc
tcggtggaggccaagccctacacccggcggccctacgcgccgttccgcaccaccacgctg
cagcaggaggcctcgcgcaagctcggcttcggcgcctcgcgcaccatgcaggtcgcgcag
cggctctacgagaacggcttcatcacctacatgcgcaccgactccacgacgctttcggag
tccgcggtcgccgcggcccgcgagcaggcgcgtgagctgtacggcgcggagtacgtcccg
gacaagccgcgcacctacgcctcgaaggtgaagaacgcccaggaggcgcacgaggcgatc
cggcccgcgggggagagcttccgcaccccggcgcagaccggcctgaccggcgagcagttc
cggctctacgagctgatctggatgcgcaccgtcgcctcgcagatgaaggacgccgagggc
cgcagcgtcaccgtccggctcggcggcggcgccgccaccggcgaggacgtggtgttctcc
gcctccggccgggtgctcaccttccacggcttcctcaaggcgtacgtcgagggccgcgac
gacgagggcgacccggagggcggcggccccgacgaccgcgagacccggctgcccgccgtc
gcagagggcgacgccgtgaccgcggcgaccctgcaggcggccggccacgagacgaagccg
ccggcgcgctacaccgaggccacgctggtgcgcgagctcgaggagcgcgagatcggccgg
ccgtcgacgtacgcctcgatcatcggcacgatcctcaaccgcggctacgtgtacaagaag
ggcaccgcgctggtgccggcctggctggccttctcggtgatccggctgctcgaggagcac
ttctcccggctggtgtcctacgagttcaccgcgagcatggaggacgtcctcgacgagatc
gccggggggcgccgcgaccgcaacagcgagctggcggcgttctacttcggcgacgccgac
gtggagggcctgaagaagctcgtcggcgagctcggcgacatcgacgcccgcgagctggcg
acgttcccgatcgtggacgggatcgacctgcgcgtgggccgctacggtccctacatcgag
acccccgacgggacccgcgcgaacgtccccgaggacctgccgcccgacgagctgaccgag
gccaaggcccgggagctgctggagaacccggcgggcgaggaggcccggctgggccaggac
ccggagagcggcctggagatcgtggcgaagaacggccgcttcggtccctacgtgaccgag
gtgctgcccgaggacgccccgaagtcgcgcaggccgcgcacctcgtcgctgttcaagtcg
atgaacctcgacacgatcaccctcgacgacgcgctccggctgctgaccctgccgcgggtg
gtcggcgccgaccccgagagcggcgacgagatcaccgcccagaacggccgctacgggccg
tacctgaagaagggcaccgactcccggtcgatcgacgccgaggagaagctgctgaccatc
acgctcgaggaggcgctggcgatctacgcccagcccaagcagcgtggccgggcagcggcc
gacccgggccgcgagctcggtgacgacccggtcagcggcgccaaggtgacggtcaagagc
ggtcggttcggccactacgtcaccgacggtgagtacaacgcgaccctgcgcgacggcgac
gacgagaagacggtgacgctcgagcgggccgccgagctgctcgcggagcggcgcgccaag
ggtccggccaagaaggcggcgaagaagggcgccaagaaggccgccaagaagtcgccggcg
aagaagacggccaagaaggccgccgtgaagaagaccgccgccaagtga
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