KEGG   Nocardioides mesophilus: H9L09_15635
Entry
H9L09_15635       CDS       T07004                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
nmes  Nocardioides mesophilus
Brite
KEGG Orthology (KO) [BR:nmes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nmes03021]
    H9L09_15635
Transcription machinery [BR:nmes03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L09_15635
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_3 Sigma70_ECF HTH_Crp_2 HTH_24 HTH_Tnp_ISL3 MarR HTH_28 MarR_2 HTH_AsnC-type IF2_N GerE Phage_antitermQ DUF7343 CMD KORA Flg_hook
Other DBs
NCBI-ProteinID: QNN51941
UniProt: A0A7G9R8L6
LinkDB
Position
complement(3234018..3234812)
AA seq 264 aa
MTTSGGEDLARVRARSAALFAQLADPDVSEAERSSLRDQLVRLHLPLVEHFARRFLNRGE
PFDDLLQVGTIGLIKAVDRFDIERGVEFSTYATPTIVGEIKRHFRDRGWAIRVPRRLQEL
RITITAATAELTQQLGRSPTVSELARKVGVSDEEIIEGLESANAYSTLSLDAPDSSDDSA
LSMIDVIGSDDEALEHVENRETIKPLLESLDPREKHILMLRFFKGMTQSQIAAEIGISQM
HVSRLLARTLAQLREQLAEPTSGV
NT seq 795 nt   +upstreamnt  +downstreamnt
atgaccacgtccggtggcgaggacctggcccgggtgcgcgcacggagcgcggcgctgttc
gcccagctggccgatcccgacgtctccgaggccgaacggtcctcgttgcgcgaccagctg
gttcgtctgcacctgccgctggtcgagcacttcgcccggcgcttcctgaaccgcggcgag
cccttcgacgacctgctccaggtcggcaccatcggcctgatcaaggccgtggaccggttc
gacatcgagcgcggcgtggagttctccacgtacgccaccccgaccatcgtgggcgagatc
aagcgacacttccgcgaccgcggctgggcgatccgggtgcctcggcgactccaggagctg
cggatcacgatcaccgcggcgaccgcggagctcacccagcagctcggccgctcccccacg
gtcagcgagctggcacgcaaggtcggcgtctccgacgaggagatcatcgagggcctggag
tcggcgaacgcctactccacgctctccctggacgcgccggactccagcgacgacagcgcg
ctgagcatgatcgacgtgatcggctcagacgacgaggcgctcgagcacgtggagaaccgc
gagacgatcaagccattgctggagtcgctcgacccgcgggagaagcacatcttgatgctg
cgcttcttcaaggggatgacccagtcccagatcgccgccgagatcggtatctcgcagatg
cacgtctcgcggctcctcgcccgcacgctcgcccagctgcgtgagcagctcgcggagccg
accagcggggtctga

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