Nocardioides mesophilus: H9L09_20300
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Entry
H9L09_20300 CDS
T07004
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nmes
Nocardioides mesophilus
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nmes03051
]
H9L09_20300 (pafA)
Enzymes [BR:
nmes01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
H9L09_20300 (pafA)
Proteasome [BR:
nmes03051
]
Prokaryotic proteasome
Bacterial regulatory particles
H9L09_20300 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QNN52747
UniProt:
A0A7G9RAX2
LinkDB
All DBs
Position
complement(4248691..4250052)
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDLVDLVAHDKAGERVLEGLLVDAERRLHDEGIAGDVYLFKNNTDSAGNSY
GCHENYLVGRQGEFSKLADVLIPFLVTRQIICGAGKVIQTPRGAMYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTLLKVSSCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDMTGRRKVRLANGREASALDIQQEYLTRARDFVDRREISTPVI
ERTLDLWERTLKAVESGDFGLVEREIDWVIKWKLIDRYRAQHGLPLSHPRVAQLDLAYHD
IHRGRGLYYLLERRGAVTRVTDDLRIFEAKTLPPQTTRARLRGEFIKRAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAHDERVHKLIEGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgccggatcttcgggatcgagaacgagtacggcgtcacctgcacgttccgcggg
cagcgacgcctctcgccggacgaggttgcccgctacctgttccgcaaggtggtctcctgg
ggccgcagcagcaacgtgttcctgcgcaacggcgcccggctctacctcgacgtcggcagc
cacccggagtacgccacccccgagtgcgacgacctcgtcgacctggtcgcccacgacaag
gcgggggagcgggtgctcgagggtctgctcgtcgacgccgagcggcgcctgcacgacgag
ggcatcgccggcgacgtctacctgttcaagaacaacaccgactcggccggaaactcctac
ggctgccacgagaactacctcgtcggacggcagggggagttcagcaagctcgccgacgtg
ctgatcccgttcctggtcacgcgccagatcatctgcggcgccggcaaggtgatccagacc
ccgcgcggcgcgatgtactccgtcagccagcgcgccgagcacatctgggagggcgtctcc
agcgccaccacccgcagccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcgctaccggcgcctgcacgtcatcgtcggggactccaacatgagcgagaccacgacg
ctgctcaaggtgtcctcctgcgacctggtgctgcggatgatcgaggagggcgtggtgatg
cgcgacctcacgatggagaacccgatccgggcgatccgcgagatctcgcacgacatgacc
ggacgccggaaggtgcggctggccaacggccgcgaggcaagcgcgctcgacatccagcag
gagtacctcacccgcgcccgcgacttcgtcgaccgccgcgagatcagcacgccggtcatc
gagcgcacgctcgacctgtgggaacgcacgctcaaggcggtggagtccggggacttcggt
ctggtcgagcgcgagatcgactgggtgatcaagtggaagctgatcgaccgctaccgcgcc
cagcacggcctcccgctcagccatccccgggtcgcgcagctcgacctggcctaccacgac
atccaccgcggccgcggcctctactacctgctcgagcgtcgcggagcggtcacgcgggtc
accgacgacctgcgcatcttcgaggcgaagacgctgccgccgcagaccacccgcgcccgc
ctgcgcggcgagttcatcaagcgagcgcaggagcgccggcgcgacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcccagcggaccgtcctgtgcaaggacccgttccgc
gcgcacgacgagcgggtgcacaagctcatcgaaggcatgtga
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