KEGG   Nonlabens marinus: NMS_0165
Entry
NMS_0165          CDS       T09770                                 
Name
(GenBank) signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nmf  Nonlabens marinus
Pathway
nmf02024  Quorum sensing
nmf03060  Protein export
nmf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NMS_0165
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NMS_0165
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NMS_0165
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nmf02044]
    NMS_0165
Enzymes [BR:nmf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NMS_0165
Secretion system [BR:nmf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NMS_0165
  Eukaryotic Sec-SRP protein
   NMS_0165
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW CbiA AAA_22 nSTAND3 CLP1_P APS_kinase KTI12 AAA_17 6PF2K AAA_33 AAA_24 AAA_16 NPHP3_N AAA_31 TsaE DO-GTPase1 KAP_NTPase AAA_18 NACHT AAA_14 ATP_bind_1 ResIII ArsA_ATPase
Other DBs
NCBI-ProteinID: BAO54174
UniProt: W8VN26
LinkDB
Position
174442..175770
AA seq 442 aa
MFDNLTDKLDKAMHVLKGHGSITEVNVADTLKEIRRALVDADVNYKIAKEFTATAKEKAI
GQGVLTTLKPGQLLTKIVKDELTELMGGSVEGMNLSGNPSIILMSGLQGSGKTTFSGKLA
NYLKTKKSKKPLLVACDIYRPAAIDQLHVVGEQIGVEVFSNRDEKDPVKISEAAIAYAKQ
NGFNAVIIDTAGRLAIDEQMMKEIADVHAAVKPHETLFVVDSMTGQDAVNTAKAFNERLN
FDGVVLTKLDGDTRGGAALSIKSVVDKPIKFIGTGEKMEAIDVFYPERMADRILGMGDVV
SLVERAQEQFDEEEARKLSKKIAKNQFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKMLK
DVDIDDDAFKGIEAIIHSMTIEERTQPQVINGSRKKRIAAGSGTSVTEVNQLLKQFDQMS
KMMKMMQGGKGKAMMQAMSKMR
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgtttgataatttaacggacaaactggacaaggcgatgcacgtccttaaaggacatggt
agcatcactgaggttaatgtggctgatacacttaaggaaatacgtcgcgcacttgtcgat
gcggatgtgaattataaaatcgccaaagaattcacggcgactgcaaaagaaaaagcaata
ggccaaggtgttcttaccacccttaagccaggacaacttctaactaaaattgtcaaagac
gagctcacggaacttatgggaggctctgttgaagggatgaatctttctggcaatcctagt
attatattgatgtccggtttgcaaggttcaggtaaaacgactttttctggaaaattggca
aattatctcaaaaccaaaaaaagtaaaaagcccctattagttgcttgtgacatttaccgt
cctgcagcaattgaccagttgcatgtagtgggagagcaaataggcgttgaggttttttcc
aacagagacgagaaagatcctgtaaaaatttctgaagctgcaatagcatatgctaaacag
aacggtttcaacgccgtgataatagatactgctggtcgtcttgctatcgacgagcaaatg
atgaaagaaattgcagatgtacatgctgcggtgaagccacacgagaccttatttgttgtg
gattccatgactggtcaagatgccgtgaatacagccaaagcctttaacgagcgtttaaat
tttgacggtgttgtacttactaaattagatggtgacacccgtggtggtgccgcactatct
attaaatctgtagtagataagcctatcaaatttataggtactggagaaaaaatggaagcg
attgatgtgttctacccagagcgtatggcagatcgtattctagggatgggtgatgtggta
tctcttgtagaacgtgcacaagagcagtttgatgaagaggaagcaaggaagttgagtaaa
aagatcgctaagaaccagttcggttttgatgacttcttatcccaaatccagcaaatcaaa
aaaatgggtaacatgaaggacctgatgggaatgatccctggcgcaggtaaaatgttgaaa
gatgtcgatattgatgacgatgcttttaaaggtatagaagccatcattcattctatgaca
attgaagagcgcacccagcctcaagtaatcaatggttcccgtaagaagcgtatcgcagca
ggaagcggtaccagcgttactgaagtaaaccagctattgaagcaatttgaccagatgagc
aagatgatgaaaatgatgcaaggtggcaaaggaaaagccatgatgcaggcgatgagcaaa
atgcgctaa

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