Nonlabens marinus: NMS_0211
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Entry
NMS_0211 CDS
T09770
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMS_0211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmf03021
]
NMS_0211
03400 DNA repair and recombination proteins [BR:
nmf03400
]
NMS_0211
Enzymes [BR:
nmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMS_0211
Transcription machinery [BR:
nmf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMS_0211
DNA repair and recombination proteins [BR:
nmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMS_0211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAO54220
UniProt:
W8VP34
LinkDB
All DBs
Position
complement(231311..232264)
Genome browser
AA seq
317 aa
AA seq
DB search
MIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRIEGVDHEFSTIEGVV
EDVTEIILNFKQVRFRRQIDEVDSEVVNVSFSGKNQFTAGDMQKYISGFQVLNPEMVICN
TESSINLNLELTIEKGRGYVPAEENKNTSAALGTISIDSIFTPIKNVKYSIENYRVEQKT
DYEKLVFEIITDGSIHPKHALTEAAKTLIHHFMLFSDERITLEADEIAQTETYDEESLHM
RQLLKTKLVDMELSVRALNCLKAAEVETLGDLVSYNKNDLMKFRNFGKKSLTELEELVNV
KGLNFGMDLSKYKLDRD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattcaaccgattttgaaggtaagtttgaattcagacctttagaacctggttat
ggtttaacagtgggaaatgctctgagaagagtattactttcctctcttgaaggattcgct
atcacatctatcagaattgaaggtgttgatcatgaattctctacaatagaaggagtagtg
gaggacgtaactgaaattattttgaatttcaagcaagttcgtttccgtagacaaattgac
gaagtagatagtgaagttgtaaatgtatctttctctggaaagaatcaattcactgctggt
gatatgcagaaatacatctctggttttcaagttttgaatcctgaaatggtaatctgtaat
acagagtcttccatcaatttaaatcttgagttgacaattgaaaaaggaagaggttatgtt
cctgctgaagagaataaaaatacaagtgctgctttaggtacaatatctattgatagtatt
tttactcctatcaaaaacgtaaagtacagcatagaaaactaccgtgttgaacaaaaaact
gattatgaaaaattagttttcgaaatcatcactgacggtagtattcaccctaagcacgct
cttactgaagcagctaagacattgatccaccacttcatgttattctcggatgagagaatt
actcttgaggcagatgaaatcgctcagacagaaacctatgatgaggaaagtctacacatg
cgccagttattgaaaactaagttagtcgatatggaactttccgtacgtgcacttaattgt
ttgaaagctgcagaagtggaaactttaggtgacctagtttcttacaacaagaacgattta
atgaagtttagaaacttcggtaagaagtccttgactgaattagaagaattggtaaatgtg
aaaggtcttaacttcggtatggatctgtccaaatataaattagaccgtgactag
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