Nonlabens marinus: NMS_1370
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Entry
NMS_1370 CDS
T09770
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nmf
Nonlabens marinus
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmf03032
]
NMS_1370
03400 DNA repair and recombination proteins [BR:
nmf03400
]
NMS_1370
Enzymes [BR:
nmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NMS_1370
DNA replication proteins [BR:
nmf03032
]
Prokaryotic type
DNA Topoisomerases
NMS_1370
DNA repair and recombination proteins [BR:
nmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NMS_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
BAO55379
UniProt:
W8VQ05
LinkDB
All DBs
Position
1422081..1424621
Genome browser
AA seq
846 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYTVASSFGHIADLPAKELGVDVDQNFEPKYIVSSDK
KDLVKKLKKMAADSDMVWLASDEDREGEAIAWHLAEQLDLKKDKTKRIVFNAITKSAVQN
AIDNPRSIDYDLVNAQQARRVLDRIVGYEISPILWRKVKGGASAGRVQSVAVRLIVEREQ
EIIDFKSDDFYRVDADFATKDKKTVKAKLPSNLSSRKEAEDFLELNKGAAYHVSDLVKKP
AKKSPAPPFTTSTLQQEASRKLSFNVSRTMQLAQRLYEAGLITYMRTDSVNLSKEAKSGA
KEEIEKAYGKDFHMERNYKGKSKGAQEAHEAIRPTDFHLHSAGADRDQTRLYELIWKRAI
ASQMSDAKLERTNVTIAADKHDKNFTASGEIVKFEGFLKVYLESTDDEDLEQEGLLPDLK
KGQPLDNLGITATERFTRPPYRYTEASLVKKLEELGIGRPSTYAPTITTIQNRKYVEKGI
SMGEERSYVQLVLKKDAIKEVGLSETTGSSKGKLIPTDVGRVVNDFLVEHFKNILDYNFT
ARVEESFDNIAEGKEEWTDMMNHFYKDFHPTVTDVAENAEREVGERVLGTDPKTGKPISV
RLGRFGAMAQIGTVEDEEKPQFASLLPSQSLNTVTLEEVMDLFKLPRTVGEYNGHPVEVN
QGRFGPYVKFNEKTFVSLEEGDDPLTLTFERAGELIAQKEKADAPIYMYDEQPVTKGVGR
FGPFIKWAGMFISVNKKYDFDNLSNDDIETLIKDKIQKEKDKLIVDWEEEGIRIEKARWG
RHNVIKGKTKIELAKTIDPLKITLEEAKEMIAKKAPKKKTAAKKKTAAKKKAPAKKKTAS
AKAKKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctggtaatagtggagtcgcccgctaaggcgaagactatagagaaattt
ttaggtaaggattatacggtggcatccagttttgggcacatcgctgacctgcctgcaaag
gaattgggtgttgatgtggaccagaattttgagcctaaatatattgttagcagcgataaa
aaggaccttgtcaagaaacttaaaaaaatggcggccgactcagatatggtctggctagct
agtgatgaggaccgtgagggggaagctattgcatggcaccttgccgagcaattggacttg
aaaaaagataaaaccaaacgtattgtatttaatgcaattactaaaagtgctgttcaaaat
gccattgacaaccctagaagtattgattatgatctagtcaatgcacagcaggcaaggcgt
gtgctggatcgaattgtaggttacgaaatatctcctattctatggagaaaagtaaaaggt
ggtgctagtgccggtagagtgcaatctgtagcggtacgattgatcgtggaaagggaacaa
gagatcatcgattttaaaagcgatgatttttatcgagtagatgctgattttgctactaag
gataagaaaacggtaaaagcaaaacttccttctaatctttcttctcgtaaggaagcagaa
gattttttagaacttaataaaggagctgcatatcatgtttctgacttggttaaaaaacca
gctaaaaagtcaccggctccaccatttacaacttccacattacaacaggaagcttctaga
aagctttcatttaatgtaagccgtacgatgcaactggcacagcgactgtatgaagccggt
ctcattacatatatgagaactgacagtgtgaacttaagtaaggaagcaaagtctggggct
aaagaagaaattgaaaaagcctatggaaaagacttccatatggagcgcaactacaaagga
aagtcaaaaggagctcaagaggcacacgaggcgattcgtccaacggatttccatttacac
tcagccggtgcagatcgcgatcagacccgtttgtatgaactgatctggaaacgtgcgatc
gcttcacaaatgagtgatgcaaaactagagcgtacaaatgtcacgattgctgcagacaag
cacgacaagaactttactgccagtggagagatcgtaaaatttgaaggtttcttgaaagta
tatcttgaaagtactgatgatgaagacctagaacaagaaggcctcttgccagacttgaag
aaagggcaaccattagataacttaggaattactgcaacagagcgatttacaagaccgcct
tatcgttatacagaagcttctctggtaaaaaaattagaggaattaggaataggtcgacca
tctacttatgctccaaccattacgacgatacaaaatcgcaagtatgtggagaaaggaata
agcatgggtgaggagcgatcctacgtgcaactggttctaaaaaaggatgcgattaaggaa
gtaggactttcagaaaccacaggaagcagtaaaggaaaattaatcccaacggacgtaggt
cgcgtggtaaatgattttctagtagagcattttaaaaatatactggactacaactttacg
gcgagagtcgaagaatcctttgacaatattgcagaaggaaaagaggaatggacagacatg
atgaaccatttctataaagattttcatccaacagtaactgacgtagctgaaaatgcggaa
cgagaagtaggggagcgtgttctagggactgaccctaaaacaggcaaacctatatcggta
agattagggcgattcggcgcaatggcgcaaataggaaccgttgaggatgaagagaagcct
caatttgctagtttattaccttcgcaatctttaaataccgttacccttgaggaagtcatg
gacttgtttaaactgccacgtacagttggggaatataacggtcacccagttgaggtaaat
caaggaagatttggaccttatgtgaaattcaacgagaaaacctttgtatctctagaagaa
ggtgatgatccattgaccctcacatttgaacgtgctggagagcttattgctcaaaaggaa
aaagcagatgctcctatatatatgtatgatgagcagcctgttactaaaggtgtgggtaga
tttggtccttttattaaatgggcgggcatgtttatctcagtcaataagaagtatgatttt
gataacctttcaaatgacgatattgaaaccttgatcaaggataaaattcaaaaggaaaag
gataagttaatcgttgattgggaagaggaaggcattcgtattgaaaaggctcgatggggt
aggcataatgtgatcaaaggcaaaactaaaattgagctagccaaaaccatagaccctttg
aaaattactttggaggaagctaaggaaatgatcgctaagaaagcgcccaagaaaaagaca
gctgccaagaagaaaaccgcagctaagaaaaaagcacccgctaaaaagaagaccgcttcc
gcgaaagcgaaaaagaaataa
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