Nonlabens marinus: NMS_1601
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Entry
NMS_1601 CDS
T09770
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nmf
Nonlabens marinus
Pathway
nmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMS_1601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmf03019
]
NMS_1601
Messenger RNA biogenesis [BR:
nmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMS_1601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
UPF0154
KH_2
KH_NusA_2nd
FtsX
Motif
Other DBs
NCBI-ProteinID:
BAO55610
UniProt:
W8VRE7
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Position
1689643..1691244
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AA seq
533 aa
AA seq
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MQVFLYIQTMDINTIIYAIVALIIGLAIGYFIAKSIVEKGKASQLIADAKKEASSIVKDA
ETQGEKIKSEKTYRAKEKFIQLKSEHEKEIMHREKKMNDAEKRIKDKESKVSNELAQNKR
LTQSLESKQKDLDEKREAFSKKQEEIEKTHSQQIKQLETISGMSGEDAKKQLVESLKDSA
RTEAMSIIQDTIEEAKLTAQQEARKVIINTIQRIGTEEAVENCVSVFNLESDDVKGRIIG
REGRNIRAIEAATGVEIIVDDTPDAIILSCFDAVRREVARLSLHKLVTDGRIHPARIEEV
VSKTRKQIDQEIAEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLC
GTMAAELGLNAKLAKRAGLLHDIGKVPETEDETPHAILGMKLAEKHGEKPEVCNAIGAHH
DEIEMTSLLSPIVQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVEKAYAIQAG
RELRVMVESEKISDERAGQLSFEISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtttttttatatatacaaaccatggatatcaatacaattatatatgcgatagtc
gcattaatcataggcctagcaataggctattttatagcaaaatcaatagtagaaaaaggc
aaagcctcccagctgattgccgacgctaaaaaagaagcctcgtctattgtaaaagacgca
gagactcaaggggagaaaataaagtctgagaaaacttacagagctaaagagaaattcatt
cagctaaaatcagagcatgaaaaggagatcatgcaccgtgaaaagaagatgaatgatgca
gagaagcgcatcaaggataaggagtccaaagtctcaaatgaattggctcaaaacaaacgc
ttgactcagagtttagaaagcaagcaaaaggatctagacgagaaaagagaggcattttcc
aagaaacaggaagagatcgagaagacacactcccaacaaatcaagcaactagaaacgatt
agcggcatgtctggggaagacgctaaaaagcaattggttgaatctttaaaagactctgct
cgtactgaagcaatgtccatcatacaagataccattgaagaagcaaagcttacggcacaa
caggaagcacgtaaagtaattatcaataccatacagcgcataggaactgaggaagcggtg
gaaaattgtgtttcggttttcaatttagaaagtgacgatgttaaaggacgcatcattggt
agagaaggacgtaatattagagcaatagaagctgctactggggtagaaattatagttgat
gatacgccagatgccatcattttaagttgttttgatgcggtgcgcagggaagtagccaga
ttgtcattacacaaactagtgactgacggtcgtattcacccagcccgtattgaagaagtt
gtcagtaaaacccgcaaacaaatcgatcaagaaattgctgaggttggaaaacgaaccgtg
atcgatctaggaattcacggcttacaccctgagttgatcaagatggtgggacgaatgaaa
tacaggtcttcttatggtcaaaacttattgcaacacagtagggaagtagcaaaactttgt
ggaactatggcagcagagttaggcttgaatgcaaaactcgctaaaagagctggattgctt
catgatataggtaaagttcctgaaacggaagatgaaactcctcacgccatcctaggtatg
aagctggccgaaaagcatggggaaaaaccagaggtttgtaacgcaattggagcccaccac
gacgagatagaaatgacatccttgttgtcccctatcgttcaggtttgtgatgcgataagt
ggcgcccgtcctggtgcaagacgccaggtattagattcttacattcaacgtttaaaagat
ttagaggatattgcttttggttttggtggagtagaaaaagcgtatgccattcaagcagga
cgagagttaagggtgatggtagaaagcgaaaagatctcagacgagagagcaggacaacta
tcctttgaaatttctcagaaaatccagacggatatgacttatcctggtcaagtcaaggtt
acggtaattcgagaaactcgagcagtaaacattgccaagtaa
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