Nonlabens marinus: NMS_1767
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Entry
NMS_1767 CDS
T09770
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMS_1767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmf03019
]
NMS_1767
03400 DNA repair and recombination proteins [BR:
nmf03400
]
NMS_1767
Enzymes [BR:
nmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMS_1767
Messenger RNA biogenesis [BR:
nmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMS_1767
DNA repair and recombination proteins [BR:
nmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMS_1767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
BAO55776
UniProt:
W8W063
LinkDB
All DBs
Position
1852706..1854898
Genome browser
AA seq
730 aa
AA seq
DB search
MAFKHSGLEENLKKYFGFSQFRGLQESVVTSLLNKEDVFVIMPTGGGKSLCYQLPALMQD
GTAIIVSPLIALMKNQVDAIRGISDNDGVAHVLNSSLTKGEIQRVKEDIENGVTKLLYVA
PESLTKEEYVDFLKDQTISFLAVDEAHCISEWGHDFRPEYRNLRKIIDRIGDDIPIIGLT
ATATPKVQEDILKNLQIPNATTFKASFNRPNLYYEVRPKTETVDADITRFIKQNEGKSGI
VYCLSRKRVEELSQVLQVNGIKAVPYHAGLDGKTRAAHQDMFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPIAEQ
EIGHALLQEMVGYSETSMSRRQYILHYFGEEFDPATGLGGDMDDNMRNPKPQREAVDEVK
KLINVVEAAGERYKSKDIVKILIGKSNAMIASHKLDAHEYFGSGKDHEATFWTALIRQVI
VARFLRKDIESYGTLKLTDVGREFVKNGKSFMMSDDHTYHDDANSIVGAGKTAALDDKLV
KMLKDLRKKVAHQKKVPPYVVFQDPSIEDMATKFPITTEELANINGVGEGKARKFGKAFV
DLISQYVEDNDIIRPDDLIIKSTGTKSGNKLYFITSIDRKLSFEDIADAKGMEMVDLINE
LESIVYSGTKLNVGYWVDEVLDDDQQEELHEYFMESENDHIDAAMEEFDGDYEEEELRLY
RLKFISEVGN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaagcattctggattagaggaaaacctcaagaaatacttcggttttagtcag
tttagaggactgcaggaaagcgtagttacctcattattaaataaggaagatgtatttgtg
atcatgcccaccggcggtggcaagtccttatgctatcaattacctgcattaatgcaagac
gggacggcgattattgtgtcgcctcttattgcgctaatgaagaatcaagtagatgccatt
cgtggtatctctgataatgatggtgtagcacacgtacttaatagcagtcttaccaagggc
gagatccagcgcgtcaaagaagacattgaaaacggagtgactaagctactttatgtagcg
cccgagtccctgactaaggaagaatatgtcgactttttaaaagatcagacgatatccttt
ctagcagtcgatgaagcccactgtattagtgaatggggtcacgactttagaccggaatac
cgcaatttgcgtaagataatagatcgcataggtgacgatatacctattatagggcttact
gctactgcgacacctaaggtgcaggaggatattctcaagaatctacaaattcctaacgca
actacttttaaagcgtcctttaatagaccgaacctttattatgaagttcgacctaaaaca
gaaacggttgatgcggacattactaggttcatcaaacagaatgaaggtaaatctgggatc
gtttactgtttgtcccgcaagcgagtagaagagctttctcaggtacttcaagtgaacggg
atcaaagcagttccctaccatgcagggctggatggaaaaacgagagccgcgcatcaagac
atgttccttatggaagatgtagatgtggtggttgctaccatagcttttggaatgggaatc
gataaaccagatgtacggtttgtaattcaccatgatatcccgaaaagtattgaatcctat
tatcaagaaaccggtagagccggtcgcgatggaggcgaaggtcattgtctggcatattat
agttataaggacattgagaaactagaaaaattcatgtctggtaaacctattgctgaacaa
gaaataggtcacgcccttttgcaggaaatggtgggttactctgagaccagcatgagtcgc
aggcagtatatcttacattattttggagaagagtttgatcccgccactggtttaggaggt
gacatggatgacaatatgcggaatccaaaaccacagcgagaagcggtggatgaggtgaaa
aagttgatcaatgtagtggaagctgcgggagaacgctataaatcaaaagacatcgtcaag
attttaatagggaagagcaacgcaatgattgcaagtcataagttggatgctcatgaatat
ttcggtagtgggaaagatcatgaagcaacattttggaccgctttgatacgacaagtcata
gttgccagattcctgcgcaaggatattgaatcttatggcacattgaaattgactgatgtc
ggtagagaatttgtcaagaatggtaaatcgtttatgatgagcgatgatcatacgtatcat
gatgacgctaactccattgtgggagctggaaaaacagctgcgcttgatgataaactggtc
aaaatgctaaaggacttgcgtaaaaaagtcgcccatcaaaaaaaggtgccgccttatgta
gtgtttcaagatccttccattgaagacatggctactaaattcccaatcaccacggaagaa
cttgctaatatcaacggagtaggagaaggcaaggcgcgtaaatttgggaaagcatttgta
gatctaatttcgcaatatgtggaagacaatgatatcattagacctgacgacttaattatt
aaatctaccggtactaaaagcggaaataaactttacttcataaccagtatagaccgcaaa
ctctcttttgaagatatcgctgacgcgaaagggatggagatggtagatcttatcaatgaa
ttagaaagtatcgtgtatagcggtactaaacttaatgtaggctattgggtagatgaggtt
ctggatgacgaccagcaagaagaactccacgagtattttatggaatctgaaaatgatcac
atcgacgctgctatggaggagtttgatggcgactatgaagaagaagagctgcgcttgtac
cgactcaaatttatcagtgaagtagggaattag
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