Nonlabens marinus: NMS_1796
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Entry
NMS_1796 CDS
T09770
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMS_1796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmf03019
]
NMS_1796
Enzymes [BR:
nmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMS_1796
Messenger RNA biogenesis [BR:
nmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMS_1796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
APP_amyloid
ERCC3_RAD25_C
HEM4
AAA_22
UvrD-helicase
ANIS5_cation-bd
Motif
Other DBs
NCBI-ProteinID:
BAO55805
UniProt:
W8VRT5
LinkDB
All DBs
Position
1876389..1877669
Genome browser
AA seq
426 aa
AA seq
DB search
MTFKELGLDESILKALQDQGYENPTPIQAQSIPILLKGKDLLGVAQTGTGKTAAFAIPIL
QQLLEGEGPRKKRKIRTLVVTPTRELAIQIDENFTAYAKYTNIKNTVIFGGVNQTKQVYA
LHQGVDVLVATPGRLLDLINQKYISLADIEYFVLDEADQMLDMGFIHDIKKLLKLLPKQR
QSLFFSATMPRAIVDLSKQILGDFERVTIEPKQTTAEKVEQRIYHVNKKHKTDLLVHLLE
GDMNDATLVFSRTKHGANKIVKDLEKAGIKSAAIHGNKSQTARQRALGDFKDGKLQALVA
TDIAARGIDIDELSYVINYDLPNVPESYVHRIGRTGRAGASGLAASFCMLEERPFLKDIE
KLIQTKIPVVDDHPFEFKMEDAAEPSLKKQGGNRGGNRSKRPSNNSRSSSGGNRNKSRNK
NRSSSN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattggggctcgacgagtccatcctgaaagctttacaggaccaagga
tatgagaatccaacacctattcaagcacaatccattcccatcttattaaaaggcaaagac
ctcctaggggttgcacaaacgggaacgggtaaaacggcagcatttgccattccgatacta
caacaattattagaaggcgaagggcctagaaaaaaacgcaaaataagaacactggtagtt
actcctacaagagagcttgccatacagattgatgaaaatttcaccgcttacgcgaaatat
accaacatcaaaaacacggtcatatttggtggtgtgaaccagacgaagcaagtatatgcg
ttgcaccagggcgttgacgtactcgtggcaactccaggaagactacttgatttgatcaac
cagaaatatatttccttagcagatatcgagtatttcgtccttgatgaggctgatcagatg
ctggacatgggtttcatccacgatatcaaaaagttgttgaaactattgcctaagcaacgt
cagtcgctattctttagtgcaaccatgcctagagcgatcgtcgatctttctaagcaaatt
ttaggagactttgagcgcgttactattgaacctaagcaaaccactgctgaaaaagtagaa
caacgcatctaccacgtcaataaaaagcacaaaaccgatttgctagttcatttgctggaa
ggcgatatgaacgatgctaccttagttttttccagaacaaaacatggagctaacaagatc
gtcaaagacctagagaaggcgggtatcaaaagtgctgctattcatggtaataagtcacaa
acggctcgtcaacgtgccttaggtgattttaaagatggaaaattacaagcgcttgtggcc
acggatattgcagccagaggtattgatatcgatgagttatcttacgtgatcaattacgat
ttgcctaacgtcccagaatcttatgttcaccgcataggtcgtacgggtagagctggagca
agcggtcttgcagcaagtttttgtatgctggaagaacgaccattcctaaaggatattgag
aaattgatccagacaaagattccagtagtggacgatcacccatttgaatttaaaatggaa
gatgctgcagaacctagtttgaaaaaacaaggtggtaatcgcggcggtaatcgctctaag
cgaccttctaacaactcaagatctagttcaggaggcaatcgcaataagagcagaaataaa
aacagaagttctagcaactaa
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