Nonlabens marinus: NMS_1937
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Entry
NMS_1937 CDS
T09770
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMS_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmf03019
]
NMS_1937
Enzymes [BR:
nmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMS_1937
Messenger RNA biogenesis [BR:
nmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMS_1937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_C_2
AAA_19
AAA
CMS1
SNF2-rel_dom
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BAO55946
UniProt:
W8W097
LinkDB
All DBs
Position
complement(2014393..2015529)
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AA seq
378 aa
AA seq
DB search
MTFKDLKLSSALLSQLEKNQFAKPTPIQEQAITPILEGKDVMGIAKTGSGKTLAYVLPLL
DRLQNQPSENREIQALVMVPTRELAVQVSEAIILFSKALKNPLITMAVYGGVSINPQMMK
MNTVDILVATPGRLLELMEKNAVKIAKTKILVLDEADKMLSMGFREEMDQVFARLPKRLQ
TLLFSATLSPKVSEIIQYLTLDPVVINIQVPEEDLALIKQIGYRVTEEKKGVLLRHLIEK
HEMKQVLIFCSSTYQVEHVNDKLNTNGITSKAIHGKKAQGTRQSHLNEFKSADSEVRCLV
TTDLLSRGIDIEFLPFVINYELPRSPKDYIHRIGRTGRAENPGTVISLVTADEANHMRVI
QKKTKMKVWMEDLPEWNS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaaagaccttaagctttccagtgcactccttagccaattggagaaaaaccaa
tttgctaagcctactcctattcaagaacaagccatcacgcccattctggaaggaaaagat
gtgatgggaattgctaaaaccggttctggaaagacccttgcttacgtcctacctttactc
gaccgcttgcaaaatcagccgtctgagaatagagaaattcaagcgctggtgatggtaccc
acacgcgaactcgctgtgcaggtaagcgaagcgatcattcttttttcaaaagccttaaaa
aacccattaatcaccatggcggtttatggaggtgtgagtatcaatccgcagatgatgaaa
atgaacacagtagacattctcgtggcaacaccagggcgtttattggaattgatggagaag
aacgcagtaaagattgccaagactaaaatcttggtattggatgaagccgataagatgttg
tcgatgggtttccgtgaagaaatggatcaggtttttgcaaggttgccgaaacgtctgcag
accttgttattttcagccacgctatcgcctaaggtttctgaaattattcagtatttgact
ctcgatcctgttgtgatcaacattcaagttccagaagaagatctggcgctcattaagcaa
attggttaccgagtaacagaagaaaaaaaaggagttttattgagacatcttattgagaag
catgagatgaagcaggtattgatcttctgctcatccacctatcaagtagagcatgtgaat
gacaaactcaacacaaatgggataacttcaaaagcgattcacggtaaaaaagcccaagga
actagacaatctcacctcaacgaattcaaaagtgcggatagcgaagtgcgctgcctcgtc
actacggatctactttctcgtggtattgatattgagtttcttccttttgtaatcaattat
gaattacctagatctcctaaagattacatccaccgtataggaaggaccggccgtgcagag
aatccaggaacggtcatctcactagtcaccgcagatgaagcaaaccacatgcgagtgatc
cagaaaaaaactaagatgaaggtttggatggaagatttaccggagtggaattcttag
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