Nonlabens marinus: NMS_2392
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Entry
NMS_2392 CDS
T09770
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03030
DNA replication
nmf03430
Mismatch repair
nmf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMS_2392
03430 Mismatch repair
NMS_2392
03440 Homologous recombination
NMS_2392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmf03032
]
NMS_2392
03400 DNA repair and recombination proteins [BR:
nmf03400
]
NMS_2392
Enzymes [BR:
nmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMS_2392
DNA replication proteins [BR:
nmf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMS_2392
DNA repair and recombination proteins [BR:
nmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMS_2392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
GIY-YIG
Pelota_N
RIBIOP_C
Motif
Other DBs
NCBI-ProteinID:
BAO56401
UniProt:
W8W0I8
LinkDB
All DBs
Position
2490974..2492338
Genome browser
AA seq
454 aa
AA seq
DB search
MYAIVDVETTGGKFNEEGITEVAIYRFDGHEVVDQFASLINPEQPIQPFVIKLTGISNAM
LERAPKFYEVAKRIIEILDGTILVAHNANFDHRMLRLEFERLGYEFDMQTLCTVELAQQL
MPEQESYSLGKLVRSLGIPITDRHRATGDALATVKLFKLLLNKDTSKDILNKSLKSFPKP
KVAPNLKTFLEKVPTSTGLYYLYNEGDDLIFIGRSRNIKKNLTQQFTSERRRSVELTALV
HDVKFEKTGSDLIAMLKENVEIKKHRPKFNKKSKKSIFSHGLYVYEDEKGYLNFQIKSAR
KDSGYVTSFSSSRSGRSFLDSMLKEYELCQKKSGQETEGGDSCYLYVKQECKGACINEES
ATAYNERAQKLIEDHNFQNANRILIDRGREVSERSVVLIENGTVKGYGYVDLQIQFTDPK
ILRNIITEIPEDPDYRHIVQSYLRHRKIHRIIKF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattgttgatgtagaaactaccggtggtaagtttaatgaagaaggaataact
gaggttgccatttatagatttgatggacatgaagttgtcgatcaatttgcaagccttatc
aatccagaacagcccatacaaccatttgtcataaaattgacaggtatcagcaatgccatg
ctggagcgcgcccctaaattttatgaagttgcaaagcgcattattgaaattttagatgga
accatcttggtggctcacaatgccaactttgaccaccgaatgctacgattggagttcgag
cgattaggttatgaatttgatatgcaaactttatgtacagtagagcttgcacagcaattg
atgccagaacaggaaagttatagtctaggaaagctggtacgatctctaggaatacccatt
acagatagacacagggcaacgggcgatgcactggcgaccgttaaattgttcaaactacta
cttaacaaagacaccagcaaggacattttaaacaagagtttaaagagtttccctaagccg
aaggtggcgcctaatctaaaaacctttttagaaaaagttccaacctcaaccggattgtat
tatttgtataatgagggtgatgatttgatattcataggtcgcagtcgcaatatcaaaaag
aatctcacacagcaatttaccagtgaacgtcgcagatctgtagagctaactgcactagtt
cacgatgtgaagtttgaaaagacaggaagtgatttaattgcgatgcttaaagagaatgtc
gagatcaaaaagcaccgccctaaattcaataaaaaatctaaaaaatctattttttctcat
ggactgtacgtttatgaagatgaaaaaggatacctgaattttcaaattaaatctgcccgt
aaggacagtggttatgtcacctccttcagcagctcacgttctggacgctcttttctagac
agcatgctcaaagaatatgagttgtgtcaaaaaaaatcaggacaagaaacggaaggtggg
gatagttgttatctctatgtaaagcaagaatgtaaaggagcttgtattaatgaagagtca
gctaccgcctataatgaacgtgcacagaaattaattgaagaccataattttcaaaatgca
aatcgcatcctcattgatcgtggacgtgaggtttcagagcgcagtgtggtacttatagaa
aacggcacggtcaaaggttatggatatgttgatcttcaaattcaatttacagaccctaaa
attttgcgtaatatcattactgaaattccggaggatcccgattaccgccacatcgttcaa
agttatttgaggcatcgcaaaatccataggatcattaaattctaa
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