Nonlabens marinus: NMS_2458
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Entry
NMS_2458 CDS
T09770
Name
(GenBank) ATP-dependent DNA helicase RecS
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nmf
Nonlabens marinus
Pathway
nmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMS_2458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmf03019
]
NMS_2458
03400 DNA repair and recombination proteins [BR:
nmf03400
]
NMS_2458
Enzymes [BR:
nmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMS_2458
Messenger RNA biogenesis [BR:
nmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMS_2458
DNA repair and recombination proteins [BR:
nmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMS_2458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
BAO56467
UniProt:
W8VXT1
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All DBs
Position
2561906..2563795
Genome browser
AA seq
629 aa
AA seq
DB search
MIEASRDILQKVYSYDAFLPLQEDIIANALKGKDTVALLPTGGGKSLCYQIPGLQLDGIC
IVVSPLVALIKDQVSRLQSLNVKAIGLTGAIRYQDLDDILDNAIFGNYKFLYLSPERLQQ
PLVQERITKMKVNLIAVDEAHCISEWGHDFRPAYRDITILKSLVPNVPVMALTATATHKV
QEDIISNLELENATVFKNSFKRDNITYRILETADKRKSTVQFYEHQPYSSIAYVRSRKNS
IEYARLLQQHYITAGFYHGGLDSKARDQSMQEWMNNTTTVIVATNAFGMGIDKSDVRSIV
HLQLPDSIESYYQETGRAGRDGKPSVAQFIYNVNDLNHAHNQFIKSLPSVDFLKLVYRKL
NNYFRIPQGEGMESPHHFSFADFCRTYDLNGVACYNALLALDRFSVLSMLQDVKDRTSIR
FRESGKNILQFAMNDPIASAIIQSLMRTYGSSQEQELNINLGLIALRSNTSEENVIRILE
KMAQQELIDAQLTPADTHINFLVPREDDRTINRFASDLEKQNKLKEAKLKAMMQLVQNRK
DCIQNLILAYFDEPVQTPCGSCSNCKPKKRSGAELNSIMLLQTLQSARTFEDLLVTLNTD
KAKLTEALRTLLEKQQVKITKDNKYIIHE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagcctctagagacatattacaaaaagtctacagttatgatgcattcctgccc
ttgcaagaggatatcattgctaatgcattaaaaggaaaagatacggtagcactattaccc
acaggtggcggtaaatctttatgctatcagattccaggattgcagctggatggtatttgt
atagttgtttctcctctcgtagcgcttataaaggaccaggtttctcgccttcaatcttta
aatgtcaaagccataggcctgacgggtgcgatacgttatcaggatctggatgatatccta
gacaatgctatttttggtaattacaagtttttgtatttaagtccagagcggttgcaacaa
cccttagttcaagagagaatcactaaaatgaaggtgaatttaatagctgtggatgaagcc
cactgcatcagcgagtggggacatgactttagacccgcctatagagatataaccatatta
aagtcattagtccctaatgttcctgttatggcactcaccgccaccgctacgcataaggtt
caggaagatatcatatctaatttagaacttgaaaacgccacagtatttaagaatagcttc
aaacgagataacatcacctatcgcattctagaaactgctgacaagcgtaaatctaccgta
caattttacgagcaccagccgtacagttccattgcatacgtgcgaagtcgtaaaaacagt
attgagtacgcccgattattacaacaacactatatcaccgctggattttatcacggcggg
ctggattcaaaagcaagggaccaatccatgcaagagtggatgaataacacaactacagtt
atagtagcaactaacgcttttgggatgggaatcgataagtcagatgtgcgcagtattgta
cacctgcaactacccgatagcattgagagttattatcaagaaaccggtcgcgccggtcgt
gatggtaaacccagcgttgctcaatttatttataatgtgaacgatcttaaccacgctcac
aatcagttcattaaaagcttgccctcggttgattttttgaaattggtgtaccgtaaattg
aacaattattttcggattccacaaggggaaggaatggaaagcccgcatcatttctcgttt
gcagatttttgtaggacttatgacttgaatggtgtggcgtgttacaatgccttgctagca
ttagatcgatttagcgtgctctcgatgttgcaagatgttaaggataggacgagtattcgc
tttcgcgaaagcggaaaaaacatactccaatttgctatgaacgaccctatagcaagtgcc
atcattcaatctctcatgcgcacttatggcagcagccaagaacaggaactcaacatcaat
ctgggcttgatcgccttgcgcagtaatacaagcgaagaaaacgttattcgtatattagag
aaaatggcgcaacaagagcttatcgatgcacagttgactccagcagatacacacattaat
tttttagtgccacgagaggatgatcgtactatcaatcgatttgcgagtgatctagaaaag
cagaacaaactgaaggaagctaagcttaaagccatgatgcagttggttcaaaatcggaag
gactgtattcagaatttgattttagcctactttgatgagcctgtacaaacaccttgcggg
agctgttccaattgtaagcctaaaaagaggtcgggagctgagcttaattctataatgctt
ttgcaaactttgcaaagcgcaaggacatttgaagaccttttagttactctaaatacggat
aaagcaaaacttacagaagcactgagaacccttttagaaaaacaacaagtaaaaatcacc
aaagacaataaatacatcattcatgaatag
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