Natrialba magadii: Nmag_0014
Help
Entry
Nmag_0014 CDS
T01176
Symbol
trmB
Name
(GenBank) TrmB family transcription regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nmg
Natrialba magadii
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmg03000
]
Nmag_0014 (trmB)
Transcription factors [BR:
nmg03000
]
Prokaryotic type
Helix-turn-helix
Other families
Nmag_0014 (trmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR_2
HTH_20
HTH_IclR
HTH_24
HTH_Cmi2_C
HTH_5
HTH_CodY
Rrf2
MarR
DUF7343
Sigma70_r4
HTH_23
HTH_9
DUF2250
Motif
Other DBs
NCBI-ProteinID:
ADD03614
UniProt:
D3SVP5
LinkDB
All DBs
Position
complement(17969..19033)
Genome browser
AA seq
354 aa
AA seq
DB search
MASDELRSTVERVGDRFNLGEYEIDAYLTVLEHGQLTASEIADRTDIPQPRVYDTVRSLS
DRGLVELRESRPMKVVAIDPGEAFDDVQSSLEQMIDELEARYTAPARDTEAVSLVKSRST
ILRYLEEVIDAAEYELSLSLTPGLLTRFEDELRNAVDAGVSVDLLITPADEAPTPAEFEY
QNVATTVRARRGITTPVIAVADGNYSVYATQDALRDDQDRYGVIFNRSSLGFLVSGFFGT
VLWTTAEETLSEDGSKRSYPRRYASIRRCVKDLIEEGGEFYATIEGRDVEVGGTRIVRGR
VLDISFEVSEEVASLTVETEEGEEVTVGGRVAALEDIEGHEIHIGRNKPPSIDD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagacgaactgcgctcgaccgtcgagcgcgtcggggatcggttcaacctcggc
gagtacgagatcgacgcctatctgaccgttctagagcacggccagctcacggcgagcgaa
attgccgaccggaccgacatcccacagccccgcgtctacgacaccgtccgcagcctcagc
gaccgtggactggtcgaactgcgcgaatcgcgtccgatgaaggtcgtcgcgatcgatccc
ggcgaggccttcgacgacgttcagagttcgctcgagcagatgatcgacgaactggaggcg
cgctacaccgcgcccgcccgtgacaccgaggccgtctcgctggtcaagtcccggtcgacg
atccttcgatacctggaggaggtcatcgacgccgcggagtacgaactgtcgctgtcgctg
acacctggtctgctgacccggttcgaggacgaactccgcaacgccgtcgacgccggcgtt
agcgtggatctgctcattacgccagccgacgaagcacccacaccggcggagttcgagtac
cagaacgtcgcgacgaccgtccgcgctcgacgcgggatcacgacgccggtcatcgccgtc
gcagacgggaactactccgtctacgcgacccaggacgccctgcgtgacgaccaggaccgc
tacggcgtcatcttcaaccgctcctccctcggcttcctcgtctccggcttcttcggcacg
gtcctctggacgaccgccgaagagacactgagcgaggacggctcgaagcgttcctacccc
cgcagatacgcctcgattcgacgctgcgtgaaggacctcatcgaggaaggtggtgagttc
tacgccaccatcgagggccgcgatgtcgaagttggcggcacccgaatcgttcgcgggcgc
gtcctcgacatctccttcgaggtcagcgaggaggtcgcgagcctcaccgtcgagaccgag
gaaggcgaggaggtcaccgtcggtggccgcgtcgccgcactcgaggacatcgagggacac
gagatccacatcggacgcaacaaaccgccgtcgatcgacgactag
DBGET
integrated database retrieval system
