Natrialba magadii: Nmag_0271
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Entry
Nmag_0271 CDS
T01176
Symbol
cbf5
Name
(GenBank) tRNA/rRNA pseudouridine synthase Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nmg
Natrialba magadii
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmg03016
]
Nmag_0271 (cbf5)
Enzymes [BR:
nmg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Nmag_0271 (cbf5)
Transfer RNA biogenesis [BR:
nmg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nmag_0271 (cbf5)
Prokaryotic type
Nmag_0271 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PUA
Pus10_C
DUF3701
Motif
Other DBs
NCBI-ProteinID:
ADD03863
UniProt:
D3SX43
LinkDB
All DBs
Position
265767..266711
Genome browser
AA seq
314 aa
AA seq
DB search
MSQRQRLRPAPGDRTPAELLQFGVVNLDKPPGPSSHQVSGWLRDAVADALAEADQSEDSD
TSPTIDQAAHAGTLDPKVTGCLPTMLGDATRLAQVFLEGHKEYVAVLECHGSIPADVEST
VAEFEGPIYQKPPRKSAVSRRLRVREIYELDVLEQGDRQLLLRIRCESGTYVRKLCHDLG
LALGTGGHMGHLRRTATSPFDDTDLYTATEFLDALAFWLEDDDPSLLYDIVDPAERILEE
IPHLVIDSTAAREVAEGAPVYAPGVRKVVADTALERGDLVACYTQVGSAVCLGKMVGDPD
AESGVVVDLERVLV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgccagcgtctccgccctgctccgggtgatcgtacaccggccgaactcctg
cagttcggcgtcgtcaacctcgataagccacccggtccctcctcacaccaggtcagtggc
tggcttcgcgatgccgtcgcagatgcgctggccgaggccgaccagagtgaggacagcgac
accagcccgaccatcgaccaggccgcccacgccggcacgctcgatcccaaagtcaccggc
tgcctgccgactatgcttggcgacgcaacccgactcgcgcaggtattcctcgagggacac
aaggagtacgtggcggtactcgagtgccacggctcgattccggctgacgtcgaatcgacc
gtcgccgagttcgaggggccgatttaccagaagccgccgcgaaagagtgcggtgtcgcgt
cgactccgcgtgcgcgagatttacgagttggacgtcctcgaacagggcgaccggcagcta
ctgttgcggattcgctgtgagagtggcacctacgttcgaaagctctgtcacgacctcgga
ctggcacttggcactggtgggcacatggggcatctgcggcgcacggcgacgtcaccgttc
gacgatacggacctctacactgcgacggagttcctcgatgcgctcgcgttctggctcgag
gacgacgatccgagtctgctgtacgacatcgtcgatcctgccgagcggatcctggaagag
attccgcatctcgttatcgactcgacggctgcgcgagaggtcgcagagggtgcaccggtc
tacgcgccaggggtgcggaaggtagtagccgacaccgcactcgagcgcggtgatctcgtt
gcttgttatacgcaggtgggatcggcggtctgtctcggcaagatggtcggcgatcctgac
gcagaatctggtgtggtcgtcgatctagagcgggttctcgtctga
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