Natrialba magadii: Nmag_0423
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Entry
Nmag_0423 CDS
T01176
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
nmg
Natrialba magadii
Pathway
nmg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nmag_0423 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmg03021
]
Nmag_0423 (rpoD)
Enzymes [BR:
nmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nmag_0423 (rpoD)
Transcription machinery [BR:
nmg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Nmag_0423 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
ADD04011
UniProt:
D3SXX1
LinkDB
All DBs
Position
416056..416805
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AA seq
249 aa
AA seq
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MSAEYDVEFVEREERDARFLVQGITPAFANGIRRAMLADVPTMAIDTVRFVENSSVMFDE
QLALRLGLVPLTTPPVGEFVEDDTVTLSIDVEGPATAYSGDLVSSDDLVQPADENVPIID
LKDGQRLEAEADAVLDRGKDHAKHQGGVAVGYRHLQRVAAVEDLPEFEDPDRRIVRGVIE
EDGELVPTSEFDHDLSNRYPGKEVTLEDVPNSFVFHVETDGSFSVEELVTRAADTIESRA
TELENAVQL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagtacgacgtcgagttcgtcgaacgcgaggaacgtgacgcacgcttcctc
gtccagggcatcacgcccgcgttcgccaacgggattcgacgcgcgatgcttgcagacgtg
ccgacgatggcgatcgacaccgttcgattcgtcgagaactcgtcggtcatgttcgacgag
cagctcgcgcttcgactcgggctcgttccgctgacgacgccgcctgtcggcgagttcgtc
gaggacgacaccgtgacgctctcgatcgacgtcgaagggccagcaaccgcctactcgggc
gatctcgtctcgagcgacgacctcgtccagcccgcagacgagaacgtcccgatcatcgac
ctcaaagacggacagcgtctcgaggccgaggcggacgccgtgctcgaccgcggtaaggac
cacgcaaaacaccagggcggtgttgcagtcggctaccgtcacctacagcgtgtcgccgcc
gtcgaggaccttcctgaattcgaggacccagaccgccgcatcgttcgcggtgtcatcgaa
gaggacggcgaactcgttccaacgagcgagttcgaccacgacctctcgaatcggtaccct
ggaaaggaagttacactcgaggacgtgccaaactcgttcgttttccacgtggagacggac
ggctcgttctcggtcgaggagctggtcacacgcgccgccgacacgatcgaatcgcgcgcg
actgaactcgaaaacgcagtacagctataa
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