Natrialba magadii: Nmag_0442
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Entry
Nmag_0442 CDS
T01176
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nmg
Natrialba magadii
Pathway
nmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nmag_0442 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmg03019
]
Nmag_0442 (rnj)
Messenger RNA biogenesis [BR:
nmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nmag_0442 (rnj)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ADD04030
UniProt:
D3SXZ0
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All DBs
Position
433282..434634
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AA seq
450 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGDDVVIFDMGLNLSQVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQIEGEQK
FGVENDLIKMDAGETMSIGDSGKVDLEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
SPVIGDPIDMERFREIGREGEGVLCYIEDCTNANKKGRTPSESVAREHLRDVLYSMEDYD
GGIVATTFSSHISRVTSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDFVDFPDDLGMFGH
RKSVDRTFKRIMNEGKENFLPVVTGHQGEPRAMLTRMARGETPYELDDGDKVVFSARVIP
EPTNEGQRYQAEKLLGMQGARVYDDIHVSGHLNQEGHYKMLDALQPQNIIPAHQDLKGLS
GYVKLCESEGYQMGRDIHVSRNGNLIQLVE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcaacaatcggcggctacgaagaagtcggacggcaaatgactgcc
gttcgcgccggtgacgacgtcgttatcttcgacatggggctgaacctttcgcaggttctc
atccacgacaacgtcgaaaccgagcggatgcacagtctcgacctgatcgacatgggcgca
attccggacgaccggatcatgagcgacctcgagggcgacgtgcaggcaatcgtgccaacg
cacggccacctggaccacatcggtgccatctccaaactggcccaccgctacgacgcaccc
atcgtcgccacgccctttacgatcgaactggtcaaacaacagatcgagggcgagcagaag
ttcggcgtcgagaacgacctgatcaagatggacgccggcgaaacaatgtcgatcggcgac
tccggcaaggtcgatctcgaattcgtcaacgtcacccactcgatcatcgacgcgatcaac
ccggtcctgcacacgcccgaaggcgcagttgtctacgggctagacaagcgcatggaccac
tcgccagtcatcggcgacccaatcgacatggagcgcttccgtgagatcggtcgcgaaggc
gagggtgtcctctgttacattgaggactgtacgaatgcgaacaagaagggccggacgccc
tccgagagcgtcgcccgcgaacacctccgggacgtcctctacagcatggaagactacgac
ggtggtatcgtcgcaacgacgttctcgagtcacatctcgcgtgtcacgagcctcgtcgag
ttcgccaaggatatcggccgacagccagtcctcctcgggcgctcgatggagaagtactcc
ggcaccgcagagcgactcgacttcgtcgacttcccggacgacctcggcatgttcggtcac
cgcaagtccgtcgaccgcacgttcaagcggatcatgaacgagggcaaggagaacttcctg
cccgtcgtgacgggccaccagggcgagccacgcgcgatgctcacccgcatggcccgcggc
gagacgccgtacgaactggacgacggcgacaaggtcgtcttctccgctcgcgtgatcccg
gagccgaccaacgagggccagcgctaccaggccgaaaagctgctcggcatgcagggcgct
cgcgtctacgacgacattcacgtctccggccacctgaatcaggagggccactacaagatg
ctcgacgcactgcagccccagaacatcatcccggcccaccaggacctgaagggactgtcg
ggctacgtcaagctctgtgagagcgaggggtaccagatgggacgagacatccacgtctcg
cgcaacggcaacctcatccagcttgtcgagtga
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