Natrialba magadii: Nmag_1139
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Entry
Nmag_1139 CDS
T01176
Symbol
spt5
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
nmg
Natrialba magadii
Pathway
nmg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Nmag_1139 (spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmg03021
]
Nmag_1139 (spt5)
03019 Messenger RNA biogenesis [BR:
nmg03019
]
Nmag_1139 (spt5)
Transcription machinery [BR:
nmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Nmag_1139 (spt5)
RNA polymerase I system
Nmag_1139 (spt5)
Messenger RNA biogenesis [BR:
nmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Nmag_1139 (spt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
ADD04723
UniProt:
D3SRL8
LinkDB
All DBs
Position
complement(1158892..1159329)
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIINREEPEIHAALAPDSLTSYVMVEAEGNAVLNRVLEDIPH
ARSIVPGESDISEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcttcgctgtcaaaacgacggcgagccaggagcgcaccgtcgcggacatgatc
atcaatcgcgaagagccagagattcacgccgcgctcgcgcctgactcgctgacctcgtac
gtgatggtcgaagccgaaggtaacgccgtcctgaaccgcgtcctcgaggacatcccccac
gcgcgcagcatcgtccccggcgagtccgacatctccgaagtcgagcacttcctctcgcca
aagccggacgtcgaggggatcgcggagggagacatcgtcgaactcatcgctgggccgttc
aaaggcgagaaggcacaggttcagcgcatcgacgaaggcaaggatcaggtgacggtcgaa
ctctacgaagcgacggttccgattccggtgacggttcgcggagaccagatccgcgtgctc
gactccgacgagcgatag
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integrated database retrieval system
