Natrialba magadii: Nmag_1686
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Entry
Nmag_1686 CDS
T01176
Name
(GenBank) homolog to DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nmg
Natrialba magadii
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmg03032
]
Nmag_1686
03400 DNA repair and recombination proteins [BR:
nmg03400
]
Nmag_1686
Enzymes [BR:
nmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Nmag_1686
DNA replication proteins [BR:
nmg03032
]
Prokaryotic type
DNA Topoisomerases
Nmag_1686
DNA repair and recombination proteins [BR:
nmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nmag_1686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ADD05262
UniProt:
D3SUK4
LinkDB
All DBs
Position
1711535..1712311
Genome browser
AA seq
258 aa
AA seq
DB search
MIDDAIRVLAGDCTVIAEGTDRSEYRGRVTTIVKPDNTVLVHDIDGYQPVAWLTRADSVS
SDRTDDFTLVAKKDTQTLRIAAHDQDGFANYPASAAGTPVGTCPDGDCTGSLVRSKGVRC
VDCGTRYGVPADATIKDDQSHCECGLPRMRVERGLAFDVCLDRNCESLDEAVREAFDREW
DCPESGCDGDLRILRRGGLIAGCEHYPECDTGFAMPGGVVDGECACGLPTFETRGGSRCL
DATCERHQRRQVGAASGH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacgcgattcgcgtgctcgccggcgactgcaccgtcatcgccgaaggtacc
gaccgctcggagtatcgtggccgggtgacgacgatcgtcaagcccgataacaccgttctc
gtccacgatatcgacggctaccagccagtcgcctggctcacccgggccgacagcgtctcc
agcgaccgcacggacgacttcaccctcgtcgcgaagaaagacacccagacgcttcgaatc
gcagcccacgatcaggacggcttcgccaactacccggcctctgcggccggcacacccgtc
ggcacctgtccggacggcgactgcaccggctcgctcgttcgctcgaagggcgtccgctgt
gtcgactgcggaacgcgctacggcgtgcccgctgatgcgacgatcaaggacgatcagtcc
cactgtgagtgtgggctcccgcgaatgcgcgtcgagcgcggcctcgcgttcgatgtctgt
ctcgaccgaaactgcgagtcgctcgacgaggccgtccgcgaggcgttcgaccgcgagtgg
gactgccccgaatcgggctgtgacggcgacctccggattctccgtcgtggcggcctcatt
gctggctgcgagcactatccggagtgtgacaccgggtttgccatgcccggcggcgtcgtc
gacggcgagtgcgcctgtggtctcccgacgttcgaaacgcgcggcggttcacggtgtctc
gacgcgacgtgtgagcgtcaccagcgcagacaggtgggggcggcgagtggccactga
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