Natrialba magadii: Nmag_2151
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Entry
Nmag_2151 CDS
T01176
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
nmg
Natrialba magadii
Pathway
nmg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nmag_2151 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmg03021
]
Nmag_2151 (rpoB1)
Enzymes [BR:
nmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nmag_2151 (rpoB1)
Transcription machinery [BR:
nmg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Nmag_2151 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
ADD05720
UniProt:
D3SW59
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All DBs
Position
2198129..2199958
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AA seq
609 aa
AA seq
DB search
MSSQQREAKVYVNGSLVGTHPDPHELAEQIREARRIGDVSEMVNVSVKDRTREVIVNADA
GRARRPLLVVEDGEPRISEQEIEALRDGDLEFEDLVDHGYVEFIDAEEEEDIYVAVEEAD
LTADHTHLEIDPQLIFSIGSGMIPYPEHNASPRITMGAGMIKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARS
HFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEEAYAHLDEDGLVNPETEVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTITLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVLGHLAPQEDMPFTENGVVPDLVLNPHALPSRMTVGHILEMIGG
KLGAMEGRRVDGTPFLGEDESALRDGLEEAGFDSAGKETMYSGVTGEKIEAEIFVGIIFY
QKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMESDVFIGHGAAMTLKERLL
DESDREFINVCGQCGMSAVENVEQRRVYCPNCEEETDIHEIEMSYAFKLLLDEMKALGIA
PRLELADAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaacaacgagaagccaaagtctacgtcaacgggtcgctggtgggaacacac
cccgatccacacgagctagccgaacagatccgcgaagcgcgacgcatcggtgacgtcagc
gagatggtcaacgtctccgtcaaagaccgtacccgcgaagtcatcgtcaacgccgacgcg
ggccgcgctcgccgcccgctgctcgtcgtcgaggacggcgagccacgcatctccgagcag
gagatcgaggcgcttcgcgacggtgatctcgagttcgaggatctcgtcgaccacggctac
gtcgagtttatcgacgcagaggaagaagaggacatctacgtcgccgtcgaggaagcggac
ctgaccgcggaccacacgcacctcgagatcgacccacagctgatcttctcgatcggctcg
gggatgattccgtacccggaacacaacgcctcgccgcgaattacgatgggtgccgggatg
atcaagcagtcgctggggctgccgtcggccaactaccggatccggccggatacgcgccag
cacctgctgcactacccacagctctcgatggtcaagacccagaccacggagcagatcggc
tacgacgaccgccctgccgcacagaacttcgtcgtcgccgtgatgagctacgaggggttc
aacatcgaggacgcactcgtcatgaacaaggcctcggtcgagcgtgcactcgctcgttcg
cacttcttccgcacctacgagggcgaggagcgacgataccctggcggtcaggaggaccgc
ttcgagattccgtcccaggacgttcgcggtgcgcgcggtgaggaagcctacgcgcatctg
gacgaggacggcctcgtcaaccccgagaccgaggtcgacgagaactctgtcctgctcggc
aagacgagtccaccgcgattcttagaggagccggacgacatgggtggcctttcgccacag
aagcgccgcgaaacctccgtgacgatgcgctcgggagagagcggcgtcgtcgacacgatc
acgctcatggagggcgaggacggctcgaagctgtcgaaggtctctgtgcgcgacgaacgg
attccggaactcggcgacaagttcgcatctcgacacggccagaagggtgttcttggccac
ctcgcaccgcaggaggacatgccgttcaccgagaacggcgtcgttcccgacctcgtgctc
aacccgcacgcgctgccatcgcgcatgaccgtcggacacatcctcgagatgatcggcggc
aaactcggcgcgatggaaggccgtcgtgtcgacgggacaccgttcctcggcgaggacgag
tccgcactgcgtgacggtctcgaggaggccggcttcgactccgcgggtaaggagacgatg
tactccggcgtgaccggcgagaagattgaagctgaaatcttcgtcgggatcattttctac
cagaagctctaccacatggtctcgaacaagctgcacgcccgttcgcgcgggccggtgcag
gtcctcacccgccagccgaccgagggtcgtgcccgcgaaggcggtctgcgtatcggggag
atggagagcgacgtcttcatcggtcacggtgctgcgatgacgctcaaggagcgactcctc
gacgagtccgaccgcgagttcatcaacgtctgtggccagtgtgggatgagcgcagtcgag
aacgtcgaacaacggcgtgtctactgtccgaactgcgaggaggagaccgacatccacgag
atcgagatgagctacgcgttcaagctcctcttggacgagatgaaagcactgggtatcgcg
ccacgactggaactggcagacgccgtctaa
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