Natrialba magadii: Nmag_2197
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Entry
Nmag_2197 CDS
T01176
Symbol
tfbA3
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nmg
Natrialba magadii
Pathway
nmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmag_2197 (tfbA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmg03021
]
Nmag_2197 (tfbA3)
Transcription machinery [BR:
nmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmag_2197 (tfbA3)
Prokaryotic type
Archaeal type
TFB
Nmag_2197 (tfbA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DnaG_DnaB_bind
Zn_ribbon_6
DZR_2
C1_1
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ADD05764
UniProt:
D3SWA3
LinkDB
All DBs
Position
complement(2251160..2252146)
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AA seq
328 aa
AA seq
DB search
MESNDSPTRCPECDGVLRERGTETLCEDCGVVVDDDPIDHGPEWRSFDDDPTDRRRTGAP
LTRSRHDRGLSTNIGYGSGSQFDRSTRITGRKRRQITRLRREHTRSQIPTKAAYNQVRAF
NEIKRIVARLSLTEAIHEQACSLFDSAQSENLLQGRSLEGFAAATVYAICRVHSLPRTID
EIVAIACADEAELKAAYAALNRDLGLETGPIDPSHFLPRFASELDLEMPTERRAYEHVTA
LKEANQICGSNPSGVAAACLYHAAGERDSWPTITQVAAADVADVAPTTVRATVKKLRALE
TESKSETETETETETETETETKGESAPE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaacgattcgccgacccgctgtccggagtgcgatggagtgctccgggagcga
ggaacggaaacgctctgtgaagactgcggcgtcgtcgtcgacgacgatccaatcgaccac
ggtcccgaatggcgatcgttcgacgacgatccgaccgaccgccgccgaactggtgcccca
cttacacgctcgcgacacgaccgaggcctctcgacgaacatcggctatgggtccggctcg
cagttcgaccgcagcactcgtatcaccggccggaagcgccgccagataactcgcctccgg
cgtgaacacacccgctcacagatcccgacgaaagctgcctacaatcaggtccgcgcgttc
aacgagatcaaacgcatcgtcgctcgactctcactaaccgaggccatccacgaacaggcc
tgttccctgttcgactccgcgcagtcggaaaacctcttacagggacggtcactcgagggg
tttgccgccgcaactgtctacgcgatctgtcgtgtccattcgctcccgcggacgatcgac
gaaatcgttgccatcgcctgcgcggacgaagccgaactcaaagccgcctacgccgccctc
aatcgcgacctcggactcgagactggaccgatcgatcccagccacttcctcccacggttc
gcctcagaactcgacctcgagatgcccaccgaacgacgcgcatacgaacacgtcacggca
ctcaaggaggcaaaccagatctgtggcagcaacccaagcggcgtcgccgcagcctgtctc
taccacgctgccggtgaacgcgattcgtggccgaccatcacgcaagtcgcagccgccgat
gtcgcagatgtcgcccccacaacggtccgggcgacagtcaaaaaacttcgtgcactcgag
acagagtcaaagtcggagacagagacagagacagagacagagacagagacagagacagag
acaaagggggaatcagcaccggagtag
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