Natrialba magadii: Nmag_2489
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Entry
Nmag_2489 CDS
T01176
Symbol
dppC4
Name
(GenBank) ABC-type transport system permease protein (probable substrate dipeptide/oligopeptide)
KO
K02034
peptide/nickel transport system permease protein
Organism
nmg
Natrialba magadii
Pathway
nmg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nmag_2489 (dppC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nmg02000
]
Nmag_2489 (dppC4)
Transporters [BR:
nmg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Nmag_2489 (dppC4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ADD06049
UniProt:
D3SY78
LinkDB
All DBs
Position
complement(2549821..2551530)
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AA seq
569 aa
AA seq
DB search
MSMNEFDDKTLRERITENPQPALAWLAGALVLVVLELGRLASGLVQVGETTRFALGGIAS
VPGSVEESVASSLGEIAGLVAFGLTVLVLLGIAAILVKWLLIPWTLVDRLGIEASTGVKD
VVERAIVTGLLVVATALVVLTPVGGVLEMAVSVLTRGVEWVGSLPTITSRELIPNEGYQQ
PDGSWEGTFLGLSPAVAWALRVAVVYAYALVWLAWLWRGYETFREHYREADWTPRDDSID
RLRNHYWGMFGLVVVIIFLVMALWAPAVSPATADANLYQPYEHEFEYYGDDGLESITHGE
ANSDSRSQGGDNNVGLMSYDDYDRFHPFGTNTDGKDLFTFLAYGAQVSLVIGLLATVLMA
VIATALALITAYYKGVADLVTIVASDSIISLPRFLLVLLLSVLFMQANHPVAEIYDGGLL
LALIFAGTGWPLLWRSVRGPALQVSEQEWIDAAKSYGQSPAATMRKHMAPYIAGYMLIYA
SLSLGGVIIGVAALSFLGFGVQAPTPEWGRAVYEGQSYIATSSWHIATLPGILVVLLVTG
FNALGDGIRDAIDPQSDAGDTAGAAGGGG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaacgaattcgacgacaagacgcttcgagaacgaatcaccgaaaacccacaa
ccggcgcttgcctggttggctggtgcgctcgtgttggtcgtcctcgagttggggcgactc
gcatccgggctcgtgcaagtcggcgagaccacccggtttgcactcggcgggatcgcatcg
gtcccgggatcggtcgaagaatccgttgcgagttcactcggtgagattgcagggcttgtc
gcgttcggcctcacggtgctcgtgttgctcggtatcgcagccatcctcgtcaagtggctg
ttgatcccgtggacgctagtcgaccgcctcggtatcgaggcaagtaccggtgtcaaagac
gttgttgaacgcgccatcgtcaccgggctactcgtcgttgccacggcgctcgtcgtgctg
acgccagtcggtggcgtcctcgagatggccgtgagcgtactgacccgcggtgtcgaatgg
gttggctcgctcccaacgattacgagccgtgaactcatcccgaacgaaggataccagcag
cctgatgggagctgggaaggaaccttcctcggtctctcacctgcagttgcgtgggcgctc
cgtgtcgctgtcgtctacgcgtacgcacttgtctggctggcctggctctggcgcggctac
gaaaccttccgcgaacactaccgtgaggctgactggacgcctcgcgacgacagtatcgac
cgcctccggaaccactactgggggatgttcggtctcgtcgtcgtcatcatattcctcgtg
atggcgctgtgggcgccggcagtgagcccggcaacagcggacgcaaacctgtaccagccg
tacgagcacgagttcgagtattacggcgacgatgggctcgaatcgatcacccacggtgag
gcaaactccgatagccgctcccagggtggtgacaacaacgtcggcctgatgagctacgac
gactacgaccggttccatccgttcgggacaaatacggacgggaaggatctctttaccttc
ctggcgtatggagcgcaggtctcgctcgtcatcggattgctcgcaaccgtcctgatggcg
gtcatcgcgacggcactcgcgctcatcacggcctactacaagggcgtcgccgacctggtg
accatcgtggccagtgactcgattatctccttaccacgattcttactggtcctgttgctc
tccgtgctgttcatgcaggccaaccacccggtcgcagagatatacgacggcggcttacta
ctggcgttaatcttcgccgggaccggctggccactcctgtggcggtcggtccgtggtccg
gcactccaggtctccgaacaggagtggatcgatgccgcaaagagctacggtcagagtccg
gcagcaaccatgcgaaagcacatggcgccgtacattgccggctacatgctcatctacgcc
tcgctgtcgctcggcggggtcatcatcggcgtcgctgcactctcgttcctcggcttcggt
gtgcaggcaccgacgcccgagtggggacgtgcagtctacgagggccagtcctacatcgcg
acgtcctcgtggcacatcgcgaccctgccagggatcctcgtcgtgttgctcgtcaccgga
ttcaacgcacttggtgacggcattcgcgacgcaatcgacccacagagtgacgccggtgac
actgccggcgccgccggaggtggtggataa
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