Natrialba magadii: Nmag_3157
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Entry
Nmag_3157 CDS
T01176
Symbol
tfeA
Name
(GenBank) transcription initiation factor TFE
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nmg
Natrialba magadii
Pathway
nmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmag_3157 (tfeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmg03021
]
Nmag_3157 (tfeA)
Transcription machinery [BR:
nmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Nmag_3157 (tfeA)
Prokaryotic type
Archaeal type
TFE
Nmag_3157 (tfeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
DUF7129
Zn_ribbon_6
DUF7576
Rad50_zn_hook
Zn_ribbon_LysW
Zn_ribbon_3
Sugarporin_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADD06709
UniProt:
D3SRT5
LinkDB
All DBs
Position
complement(3273146..3273682)
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AA seq
178 aa
AA seq
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MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLHDALEQRQEYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVTSMEDRLAALESELNLDADVDVDA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggatccagtcatccagaagtacttgcacgagctggtc
ggtcccaaggggatgcccgttgcggcggcaccaccggacggggaagtgaccgacgaggaa
ctcgcggaggagctggatctcgagttgaacgacgttcggcgcgcgctgtttatcctgtac
gagaacgatctcgccagctaccgacggctgcgcgacgaggactcaggctggttgacgtac
ctctggaccttcgagtacgacaacatccccgagaacctagaagaggagatgtaccgcctc
cacgacgcactcgaacagcgccaggagtacgagcgaaatcacgagttctacctctgtgaa
atctgctcgatccgcttcgagttcggtgaggcgatggactttggcttcgagtgccccgag
tgtggctcgccactcgagtccatggacaacgaccgactcgtcacgtcgatggaggaccga
ctcgcggcactcgagagcgaactgaatctcgatgctgacgtggatgtggatgcctga
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