KEGG   Natrialba magadii: Nmag_3388
Entry
Nmag_3388         CDS       T01176                                 
Symbol
lhr1
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nmg  Natrialba magadii
Brite
KEGG Orthology (KO) [BR:nmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nmg03400]
    Nmag_3388 (lhr1)
Enzymes [BR:nmg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Nmag_3388 (lhr1)
    5.6.2.6  RNA 3'-5' helicase
     Nmag_3388 (lhr1)
DNA repair and recombination proteins [BR:nmg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Nmag_3388 (lhr1)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 DUF4379 DUF116 HypA Zn_ribbon_8 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: ADD06938
UniProt: D3ST71
LinkDB
Position
3518477..3521341
AA seq 954 aa
MTEGDVAAFSQLGTMVRGALSERGFSTPTAPQRLAIPPLAAGENTLVIAPTGSGKTETAM
LPVFDDLVDERPEGFGALYITPLRALNRDMLDRLEWWGDFLDLEVDVRHGDTTDYQRSKQ
AEDPPDVLITTPETVQAMLTGDRLRDALADLSHVVIDEVHELAASKRGAQLSIGLERLRD
LSGGFQRIGLSATVGDPSEVGQFLTGGRRCEIREIDVGSNVDVTVRQPEIRPEDEQLAGQ
LMTEADTASHVRLIRDLVEEHESTLIFVNTRQTAEALGSRFTELDLPIGVHHGSLSKEAR
IDVEDRFKAGDLDGLLCTSSMELGIDVGRVDHVIQYKSPRQVARLLQRIGRAGHRRDEVS
IGTIVTTRPDDTFEALSIARRARDGEVEPARIHEGSLDVVANQIPGLVHSRGSVHVRDAY
ETISRAYPFRDLELETFREVLGELHRNRIVWFDEGEDRIETSGGTWQYVYANLSMIPDEE
TYEVHDIASSSQIGTLDERFVVNFAQPGEVFIQRGEMWRIAEIDDDESRVKVSPIEDPAG
EVPSWIGQEIPVPAAVAQEVGEIRAVAEPQLEAGADARAVGRELSGRYPGDEYTLTEACT
QLERQVDADADTDAADTSPMPMPTADRIVLERQGRTIVLNACYGHMANETLGRLLSSLLG
QRAGSSVGLETDPYRIELEVPTSVATSDVLEVIEETDPDHVQAIIELGLKNSDALAFRLA
QVSAKFGALKRWQGQGSGRLSNDRLLAALEDTPMYEEAIREVFHEDLDVERAAAVLEGLQ
SGEIELVTHRGRTPVGQGGRSSGGKELLAPENADAGVIETVKERLQDDRVILLCTHCTEW
KARTKVKRVQEQPKCPECGSTRIASLNPWADEVVQAVRAAEKDDEQEQMTERAFRAASLV
QSHGKQAVIAMAARGVGPHNAAQIINKLREDETEFYRDILSKEREYARTQAFWD
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgactgagggggacgtcgcggccttttcccagctcggtacgatggttcgcggggcgctc
tccgagcgcgggttctcgacgccaacggcaccacaacggcttgcgattccgccgctcgcc
gccggcgagaacacgctcgtcattgcccccaccgggagtggcaagaccgagaccgccatg
ctccccgtcttcgacgacctcgtcgacgagcgcccagaagggttcggtgcgctctacatc
accccacttcgggcgctcaaccgcgacatgctcgaccgactcgagtggtggggcgacttt
ctcgacctcgaggtcgacgttcgccacggcgacacgacggactaccagcgcagcaagcag
gccgaggacccgcctgacgtgctcattacgacgcccgaaaccgtccaggcgatgctcacc
ggtgaccgcctccgcgacgcgctcgcggacctctcacatgtcgtcatcgacgaggtgcac
gaactcgcggcctcaaagcgcggcgcgcagctttcgatcgggctcgagcgcctccgcgat
ctgtccggtggcttccagcggatcgggctctccgcgacggtcggcgatccgagtgaggtc
ggccagttcctcaccggcggtcggcgctgtgaaatccgcgaaatcgacgtcgggagcaac
gttgacgtgaccgttcgccagcccgagatccggccagaagacgagcaactcgccggccaa
ctgatgaccgaggccgacacggcgagccacgtccgactgattcgggacctcgtcgaggaa
cacgaatccacgctcatcttcgtcaatacgcgccagacagcagaagcactgggatcgcgg
ttcaccgagctcgacctccccatcggcgtccaccacggctcgctctcaaaagaagcccga
atcgacgtcgaggatcggttcaaggcgggcgacctcgacggcctgctctgtacgtcctcg
atggagctcggaatcgacgtcggccgggtcgatcacgtaatccagtacaagagcccccgg
caggtcgctcgcctgctccagcggatcggccgcgcgggccaccgacgggacgaggtctcg
attgggaccatcgtcacgacccgaccggacgacactttcgaggcgctgtcgatcgcccgc
cgcgctcgcgacggggaggtcgaaccggcccgaatccacgaggggagcctcgacgtggtc
gcaaatcagattccgggactcgtccacagccgcggctcagtgcacgttcgggacgcctac
gagacgatcagccgggcgtatccgttccgtgacctcgaactggagacgttccgcgaagtt
ctcggcgaactccaccgcaatcgaatcgtctggttcgacgagggcgaagaccgcatcgag
acctcaggcggcacctggcagtacgtctacgccaacctctcgatgatccccgacgaggag
acctacgaggtccacgacatcgcctcgagttcccagattggaaccttagacgagcgattc
gtcgtcaacttcgcccagcccggcgaggtgttcatccagcgcggcgagatgtggcgtatc
gccgaaatcgacgacgacgagagccgcgtgaaggtcagcccaatcgaggaccccgccggc
gaagtcccctcctggatcggccaggagattccggtccccgcggcggtcgcacaggaggtc
ggcgagatccgcgccgtcgccgagccacaactcgaggcgggtgccgacgcacgcgccgtc
ggtcgcgaactctcgggccgctaccccggcgacgagtacaccctgaccgaggcctgcaca
caactcgaacgacaggtcgatgctgacgccgacaccgacgccgcggacacctcgccgatg
cccatgcccaccgcagaccgaatcgtcctcgaacgacagggcagaaccatcgttctcaac
gcctgctacggccacatggcaaacgagacgctcggtcgcctcctctcgtcgctgctcggc
cagcgtgccggctcctcggtcggcctcgagacggacccgtaccggatcgaactcgaggtt
cccacgtcggtcgcgacgagcgacgtcctcgaagtgatcgaagagacggatcccgaccac
gtccaggcgatcatcgaactcggcctcaagaactccgacgcgctcgccttccgcctggcg
caggtctcggccaagttcggcgcgctcaagcgctggcaaggtcagggttcgggccggctt
tcgaacgaccgactgctcgccgcactcgaggacaccccgatgtacgaggaggcgattcgg
gaggtgttccacgaggatctggatgtcgagcgagcggcagcagtgttagaagggctgcag
tcgggcgagatcgaactcgttactcaccgcggacggacaccggttggacagggcggtcgc
tccagcggcggaaaggaactgctcgcgccggagaacgccgacgcgggcgtgatcgagacg
gtcaaggaacgcctgcaggacgaccgcgtcatcctgctgtgtacccactgcacggagtgg
aaggcccggacgaaagtaaagcgcgtccaggagcagccgaagtgccccgagtgtggctcg
actcgcatcgcctcgctgaacccgtgggccgacgaggtcgtccaggcggtccgtgccgcc
gaaaaggacgacgaacaggagcagatgaccgaacgcgcgtttcgggccgcaagtctcgtc
cagagccacggcaagcaggctgtgatcgcgatggcagcccgtggcgtcggcccgcacaac
gccgcccagatcatcaacaagcttcgagaggacgaaaccgagttttaccgggacattctc
tcgaaggagcgagagtacgctcggacgcaggcgttctgggactga

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