Neisseria meningitidis H44/76 (serogroup B): NMBH4476_0129
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Entry
NMBH4476_0129 CDS
T01946
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nmh
Neisseria meningitidis H44/76 (serogroup B)
Pathway
nmh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMBH4476_0129 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmh03021
]
NMBH4476_0129 (rpoB)
03400 DNA repair and recombination proteins [BR:
nmh03400
]
NMBH4476_0129 (rpoB)
Enzymes [BR:
nmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMBH4476_0129 (rpoB)
Transcription machinery [BR:
nmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMBH4476_0129 (rpoB)
DNA repair and recombination proteins [BR:
nmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMBH4476_0129 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ADY94800
LinkDB
All DBs
Position
137104..141282
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSNG
VQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLGK
ALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTDE
TAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDFGELALGQNMTIAFMPWNGYNYE
DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLD
ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI
TLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaagcgggaaaat
gttttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagtttttgcag
ctggaaaatgcttttgacaaacgtaccgatgacggtctgcaggcggcatttaattctatt
ttcccgattgtgagccataacggttatgcgcgattggagtttgtgcattacacattgggc
gagcctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcccccttg
cgcgcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggtaaaagaa
gttcgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggttctttt
gtgattaacggcacagagcgtgtgattgtctcccagttgcaccgttcgcccggcgtattc
ttcgagcatgacaaaggtaagacgcactcttccggcaaattgttattctccgcccgcatc
attccctaccgtggttcatggttggattttgaatttgatccgaaagatttgctgtatttc
cgtatcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttaggctacaac
aatgagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttcaaacggt
gttcaaaccgatttggttgcagaccgtctgaaaggcgaaactgccaaggtcgatatcttg
gataaagaaggcaatgtattggttgccaaaggtaagcgcattactgcgaaaaatatccgt
gatattaccaatgcaggcctgacccgtttggatgtagaaccggaaagcctgctgggcaaa
gcattggctgccgatctgattgattcggaaaccggcgaggtattggcttctgccaatgat
gaaattacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaattacgacc
ctttatatcaatgagctggatcagggtgcttatatctccaataccttgcgtacggatgag
actgccggccggcaggcggctcgtgttgcgatttaccgtatgatgcgtccgggcgaaccg
cccaccgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagacagctac
gatctgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaactgtcc
gaagcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggtgctgcc
gacaaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgactttggtc
gagttgcgtaacggccatggcgaagtggacgatatcgatcacttgggcaaccgccgagta
cgttcggtaggcgagctgactgaaaaccaattccgtagcggtttggcccgtgtggaacgt
gccgtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgatttgatt
aatgcaaaacctgtttctgccgctattaaagaattcttcggctccagccaattgagtcag
tttatggatcagaccaaccccttgtctgaagtaacccataaacgccgtgtatctgcattg
ggtccgggcggtttgacccgcgaacgtgcaggatttgaggtgcgggacgtgcatccgacc
cactacggtcgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttgatcaac
tcattgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttaccgccgc
gttatcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaaggccgc
tatgtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggcgatttg
gttacctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaatatatg
gacgtggcaactggtcaagtggtatccgttgcagcatccctgattccattcttggaacat
gatgacgcgaaccgcgcattgatgggtgccaacatgcaacgtcaggcagtgccttgcttg
cgtcctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgactctgct
actgcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgcgttgtg
atccgtgtccatgacgacgaagcgactgccggtgaagtgggtgtcgatatttacaacttg
gttaaattcacccgttccaaccagtctaccaatatcaatcagcgtcctgccgtcaaagcc
ggcgatgttttgcaacgcggcgatttggtggccgacggcgcgtccaccgattttggcgaa
ttggctttgggtcaaaatatgaccatcgccttcatgccgtggaacggttacaactacgaa
gactcgattctgatttccgaaaaagtggctgcggacgaccgctatacttcgattcacatt
gaggaattgaatgtcgttgcccgcgatactaagctgggtgcggaagacattacccgcgat
attccgaacttgtccgagcgtatgcaaaaccgtttggacgaatccggtatcgtttacatc
ggtgcggaagtagaagccggcgatgtgttggtaggcaaggtaacgcctaaaggcgaaacc
caactgacgccggaagaaaaactgctgcgcgccatcttcggtgaaaaagcatctgacgta
aaagatacttcattgcgtatgcctaccggcatgagcggtaccgttatcgacgttcaagtc
ttcactcgtgaaggtattcaacgcgacaaacgtgctcaatccattatcgattccgaattg
aaacgctaccgtttggatttgaacgaccaattgcgtattttcgacaacgacgcattcgac
cgtatcgagcgtatgattgtcggtcagaaagccaacggtggtccgatgaagctggccaaa
ggcagcgaaatcacgaccgaatatctggcgggtctgccgagcaggcacgattggttcgat
atccgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagcctgcaa
caaaaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacccaaggc
gacgaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaacgccgt
ctgcaagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcgcgcatt
ctgccagtggaagacatgccttacatggcggacggccgtccggtagacatcgtactgaac
ccattgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttgggttgg
gcagcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaagcaggc
gagttgcgcgagttcttgaacagactctacaacggcagcggtaagaaagaagatttggat
gccctgactgatgaagaaatcatcgaactggcctccaacctgcgcaaaggtgcatctttc
gcctctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgctgaacttggct
tatccgagcgacgatcctgaggttgaaaaactgggcttcaacgacagtaaaacccaaatc
acgctgtatgacggccgttcaggcgaagcatttgaccgcaaggttacagtaggtgtgatg
cactatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccg
tacagtctggttacccagcagcctttgggcggtaaagcccagttcggcggccaacgtttc
ggcgagatggaggtttgggcattggaagcatacggcgcggcatacacgctgcaagagatg
ctgactgtgaagtctgacgacgtgaacggccgtaccaaaatgtacgaaaacatcgtcaaa
ggcgaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggtcaaagagatt
cgctcactgggcttggatatcgatttggaacgttactaa
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