Neisseria meningitidis H44/76 (serogroup B): NMBH4476_1010
Help
Entry
NMBH4476_1010 CDS
T01946
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nmh
Neisseria meningitidis H44/76 (serogroup B)
Pathway
nmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMBH4476_1010 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmh03019
]
NMBH4476_1010 (rnr)
03016 Transfer RNA biogenesis [BR:
nmh03016
]
NMBH4476_1010 (rnr)
Enzymes [BR:
nmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NMBH4476_1010 (rnr)
Messenger RNA biogenesis [BR:
nmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMBH4476_1010 (rnr)
Transfer RNA biogenesis [BR:
nmh03016
]
Prokaryotic type
tRNA degradation factors
NMBH4476_1010 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADY95620
LinkDB
All DBs
Position
complement(1126896..1129271)
Genome browser
AA seq
791 aa
AA seq
DB search
MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVPSKIESLARELSITEDE
YVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHKDGFGFAVPLTPAKDGDFV
LYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQSKVVGRFYMDRGVAILEPED
KRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA
VRKHHLPHQFSEACAKAAKKIPVHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK
VGRNYRLVVAIADVSHYVRPDDVIDADAQERSTSVYFPRRVIPMLPENLSNGICSLNPDV
ERLCMVCDMVVTYAGNIKEYRFYPAVMRSHARLTYNQVWKWISDGIDHPYKAQIDTLYKL
FKILQKKRFERGAVEFESVETQMIFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF
LLKNKHTALFRNHLGPTPEKLATLREQLGLLGLQLGGGDNPSPKDYAALVEQFKGRPDAE
LLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDG
IHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLI
AGGSGRGRKVKSSASAKPAGTAGKGKPKTAAEKKTARGGKVRGRGASAAAESRKKAKKPV
PIKVKKRKGKS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatattaaatctttaaatttacgggaaaaagacccgtttttaagtcgtgaa
aaacagcgttatgaacatcctttgcccagtcgggaatggataatcgaattgttggagcgc
aaaggtgtgccttcaaaaatcgaatcgcttgcgcgcgagctgtcgattacggaagacgag
tatgtcttttttgaacgccgtctgaaggcgatggcgcgggacggtcaggttttaatcaac
cgtcggggcgcggtttgcgcggcggacaaattggatttggtcaaatgccgcgtcgaggcg
cataaggacggtttcggttttgccgtgccgctcacgcccgccaaagacggtgattttgtt
ttgtatgaacgccagatgcgcggcattatgcacggcgatattgtcactgttcgtcctgcc
ggcatggaccgtaggggccgccgcgaagggacagttctggatattgtcgaacgcgcgcaa
agcaaagtggtcggccgtttctatatggataggggcgtggcgattttggagccggaagac
aagcgtctgaaccaaagcatcgtattggaaccggacggcgtggcgcgtttcaaacctgaa
tccggtcaggtcatcgtcggcgaaattgaggtttatcctgagcaaaaccggccggcagtg
gcaaaaatcatcgaagttttgggcgattatgccgacagcggcatggagattgaaattgcc
gtgcgcaagcatcatttgccgcaccaattcagtgaagcgtgtgccaaagctgcgaaaaaa
attcccgtccatgtacgcaaaagcgatttgaaaggccgcgtcgatttgcgcgacctgcct
ttggtaacgatagacggcgaaacggcgcgcgatttcgacgacgcggtgtttgccgaaaaa
gtcggacgcaattaccgtctggtcgtggcgattgcggatgtcagccattatgtccgccct
gacgatgtgattgatgcagatgctcaagaacgcagtaccagcgtatatttcccgcgccgt
gtgattccgatgctgccggaaaacctgtctaacggcatttgctcgctcaatcccgatgtc
gagcgtttgtgtatggtgtgcgatatggtcgttacctatgcgggcaatatcaaagaatac
cgcttctaccccgccgtaatgcgctctcatgcccgcctgacctacaaccaagtttggaaa
tggatttcagacggcatcgaccatccgtacaaagcccaaatcgacaccctttacaaactc
ttcaaaatccttcagaaaaagcgtttcgaacgcggcgcggtggagtttgaaagcgtcgaa
acccagatgattttcgatgacaacggcaaaatcgaaaaaatcgtccccgttgtccgcaac
gatgcccacaagctgattgaagaatgtatgctggcggcgaatgtttgcgcagcggatttc
ctgttgaaaaacaagcatacggctttgttccgcaaccatttgggccccacgcccgaaaaa
ctcgccaccctgcgcgagcagctcggtctgttggggcttcaacttggcggcggcgacaac
ccgtcgccgaaagactatgccgcgcttgtcgaacaattcaaaggcagacctgatgccgaa
ttgctgcaagtcatgatgttgcgctccatgcagcaggcggtttacgaaccgcattgcgac
ggacactttggtcttgcctacgaagcatacgcccacttcacctcgcccatccgccgctat
cccgacctgaccgtacaccgcgccatcaaagccgtgttgaatcagcaaacctacacgcca
aaaaaaagctggcaggctttgggcgtgcatacctcgttctgtgagcgccgtgccgacgac
gccagccgcgacgtggaaaactggctgaaaacctattatatgcgcgataaggtcggcgaa
gtattcgaaggtaaaatctccggcatgaccagttttggtatctttgtaacactggacggc
atccacattgacggcttggtgcatatcagcgatttgggcgaagactatttcaacttccgc
cccgaaatcatggcaatcgaaggcgaacgcagcggcatccgtttcaacatgggggacagg
gttgccgtccgggtcgcccgtgccgatttggatgacggaaaaatcgattttgtcctgatt
gccggggggagcggcagggggcggaaagttaaatcatccgcgtctgccaaaccggcaggg
acggcggggaaagggaagccgaaaaccgccgccgagaaaaaaacagcccgaggcggcaaa
gtaaggggaaggggcgcgtctgccgccgcagaatcgaggaaaaaggcaaagaaaccggtt
ccgattaaggtaaaaaaacggaaaggcaaatcataa
DBGET
integrated database retrieval system
