Neisseria meningitidis alpha14 (cnl strain): NMO_0503
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Entry
NMO_0503 CDS
T00954
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nmi
Neisseria meningitidis alpha14 (cnl strain)
Pathway
nmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMO_0503 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmi03021
]
NMO_0503 (rho)
03019 Messenger RNA biogenesis [BR:
nmi03019
]
NMO_0503 (rho)
Transcription machinery [BR:
nmi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NMO_0503 (rho)
Messenger RNA biogenesis [BR:
nmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NMO_0503 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBA04461
UniProt:
C6S5N6
LinkDB
All DBs
Position
complement(546825..548084)
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AA seq
419 aa
AA seq
DB search
MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMKKGEGFTCSGTLEILPD
GFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDTIN
GDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGRAIDLISPIGKGQRALLVAPP
KSGKTVMLQNIAHAITANYPEVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPAQRHV
QVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNTVVPTSGKILTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAINI
NKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEAAEFLIGKIKASKNNDDFFELMRGK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtctccgaattacaaaccctgcacatttccaaactcttagaattggcggaagaa
cacggcatcgaaaacgccaaccgattccgcaaacaagacctcgtatttgccatcgtccgc
cagatgatgaaaaaaggcgagggtttcacctgctccggcacgcttgaaatcctgcccgac
ggcttcggcttcctccgcagcgcggacacgtcctatcttgccggccccgacgacatctat
gtctcgcccacccaaatccgccgcttcaacctgcatacgggcgacaccatcgaaggaagc
gtgcgcgtcccaaaagacaacgaacgctattttgccctagtcaggcttgataccatcaac
ggcgaccacccggaagtatgccgccataaaatcctgtttgaaaacctgaccccgctgttt
ccgaccgaacagttgaagctggaacgcgatttaaagtccgaagaaaaccttaccggacgt
gccatcgacctgatttcccccatcggcaaaggtcaacgcgccctcttggttgccccgccc
aaaagcggtaaaaccgtgatgctgcaaaatattgcccatgccattaccgcaaactatcct
gaagtcgagctcatcgtcctcttgattgacgaacgtcccgaagaagttaccgaaatgagc
cgctccgtccgtggcgaagtagtctcctccacttttgacgagccggcgcaacgccacgtc
caagttgccgaaatggtgcttgaaaaagccaagcgtatggtggaacacaaaaaagacgtg
gtcatcctgctggattcgattacccgccttgcccgcgcctacaataccgtcgtgcctacc
tcgggcaaaatcctaaccggcggtgtcgatgccaacgcactgcaccgtcccaaacgtttc
ttcggcgcggcgcgcaacgtggaagaaggcggttcgctgaccatcattgccaccgcattg
gttgaaaccggcagccgtatggacgatgtgatttacgaagaattcaaaggcaccggcaat
atggaattgcacctcgaccgccgtatggcggaaaaacgcctcttccccgccatcaacatc
aacaaatccggcacgcgccgcgaagagctgcttgtgccgaacgaccagttgcaacgtatg
tggctcttacgcaagttcctgcacccgatggacgaaatcgaggcagccgaatttttaatc
gggaaaatcaaagcctctaaaaacaatgatgatttctttgaactgatgcgcggcaaataa
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