Neisseria meningitidis alpha14 (cnl strain): NMO_1842
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Entry
NMO_1842 CDS
T00954
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nmi
Neisseria meningitidis alpha14 (cnl strain)
Pathway
nmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMO_1842 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmi03019
]
NMO_1842 (rne)
03009 Ribosome biogenesis [BR:
nmi03009
]
NMO_1842 (rne)
Enzymes [BR:
nmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMO_1842 (rne)
Messenger RNA biogenesis [BR:
nmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMO_1842 (rne)
Ribosome biogenesis [BR:
nmi03009
]
Prokaryotic type
rRNA processing factors
NMO_1842 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_Tnp_IS1
Motif
Other DBs
NCBI-ProteinID:
CBA08287
UniProt:
C6S9A2
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All DBs
Position
1986862..1989645
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AA seq
927 aa
AA seq
DB search
MPPVHEVIMKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPS
LEACFVDYGTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGA
ALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIG
RSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQ
EVYDQVSEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDH
TEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKH
QRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRG
IESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPN
IHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRH
TSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQN
PRRSKREGSKVEVREVAGKTAGQEARADKAETRNNGNRRRNERGDRAAGRADEAEIQDRN
IQPAATVADAAPSETEVQTGKRRRNGSRSERGQTAPETATVAETTVQTAENTPSEPHTAE
DKGSKPKSERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKV
RSAAAHVFGETDANAPITVSIADPVAERDLPTASPAVSNGDAPVYDAAEKIRRATAAILP
EGATPKAEAQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGL
RRSEQPKPSEVATVPAEEMIQVETRQG
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgtccacgaggtgatcatgaaaagaatgttatttaacgcaacgcaggccgaa
gagctgcgcgttgccatcgtcgacggacaaaacctgctggatttggacatcgaaacgctg
ggcaaagaacagcgcaaaggcaatatctacaaaggcatcattacccgcatcgagccgtcg
ctggaagcgtgtttcgtggattacggaaccgaccgccacggcttcttgccgtttaaagaa
gtatcgcgttcgtatttccgcgactacgaaggcggcagggcgcgtattcaggacgtgctc
aaagaaggcatggaagtcatcgtccaagtcgaaaaagacgagcgcggcaacaaaggcgcg
gcactgaccaccttcatcagcctcgccggccgctatctcgtactgatgccgaacaacccg
cgcggcggcggcgtatcccgccgtatcgaaggtgaagagcgtcaagagttgaaagccgcc
atggcggaactcgacattccgaacggcatgagcatcatcgcccgcaccgccggcatcggg
cgcagcgcggaagagttggaatgggacttgaactacctcaaacaactctggcaggcgatt
gaagaagcaggaaaggcgcatcatgacccctacctgctctttatggaaagctcgctgctc
atccgcgccatccgcgactatttccgccccgacatcggcgagattttggtggacaatcaa
gaagtttacgaccaagtttccgagttcatgagctatgtcatgccgggcaatataggccgt
ctgaaactctacgaagaccacacgccgctgttttcccgcttccaaatcgaacaccaaatc
gaaagcgcgttttcgcgcagcgtcagcctgccctccggcggcgcgatcgtcatcgaccat
accgaagccctcgtctccatcgacgtgaactccgcacgcgccactcgcggcgcagacatt
gaagacaccgcgttcaaaaccaatatggaagccgccgaagaagtcgcccgacaaatgcgc
ctgcgcgacttgggcggcttggtcgtcatcgacttcatcgacatggaaaaccccaaacac
cagcgcgatgtggaaaacgtcctgcgcgacgcgctcaaaaaagaccgcgcccgcgtacag
atgggcaaactctcccgtttcggccttttggaattgagccgccaacgtttgaaaccggct
ttgggcgaaagcagccacgtcgcctgtccgcgctgcgccggcaccggcgtgattcggggc
atcgaatccaccgccctgcacgttttacgcatcattcaagaagaagcgatgaaggacaac
accggagaagtgcgcgcccaagtgcccgtcgatgtcgccaccttcctgctgaacgaaaaa
cgcgccgagctgtttgcgatggaagagcgtttggatgtcaacgtcgtcctgattccgaac
atccacctcgaaaatccgcactacgaaatcaaccgcatccgcaccgacgacgtagaagaa
gacggcgaaccgagctacaaacgcgtcgccgagcctgaagaagacgaatccgccaaaccg
ttcggcggcgaaaaagccaaagccgcccgtcccgaacccgccgtcaaaggcgtgcgccac
accagccccgccccgactgccgcccccgagaaaaaaacctcttggtgggacagcttcaaa
gcttggctcaaacgcattttcggcggcagcgaaacccaagccgcgcccgctgccgaaacc
tccgaaaaacgcagcacggcaaaccgcagcggcagccgcgccaacaaccgccgccaaaac
ccgcgccgcagcaaacgcgaaggcagcaaagtagaagtccgcgaagtggcaggcaaaact
gccggacaggaagcgcgtgccgacaaagccgaaacgcgcaacaacggcaaccgccgccgc
aacgaacgcggcgaccgtgccgccggacgcgccgacgaagcggaaatccaagaccgcaac
atacagcctgccgcaaccgttgcagatgccgcaccgtccgaaaccgaagtgcaaaccgga
aaacgccgccgcaacggcagccgcagcgaacgcggccaaaccgcgccggaaaccgccacc
gttgccgaaacaaccgttcagacagcggaaaacacgccgtccgaaccgcataccgcagaa
gacaaaggcagcaagcccaaatccgaacgcaaccgccgcgaacgcgacagccgagatgcc
aaagaacgccgcgagcgcaacaatcagcgcgaccgccgtcaaaacggcaaaaaacgcaat
attccgtctgccgccaaaatcgagcagtacctgaatattcacgacaccgccgacaaagtc
cgttccgccgccgcgcacgttttcggcgaaaccgacgcaaacgcgccgattaccgtcagc
attgccgatccggttgcagaaagggatcttccgacagcatctcccgccgtttcaaacggc
gacgcaccggtttatgatgcggcggaaaaaatccgccgtgccaccgccgccatcctgccc
gaaggcgcgacaccgaaagccgaagcacaggaaatgccgtctgaaaccgcaacctttacg
gctgcggcggaacaggcacgggaaaccgcacaaaccggcggactcgtcctgatcgaaacc
gaccctgccgcattgaaggcatgggcggcacaacccgaagtccaagccggacgcggtttg
cgccgttccgaacagcccaagccgtctgaagtcgcaaccgtccctgccgaagaaatgatc
caagtcgaaacccggcaaggctga
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