Neisseria meningitidis alpha14 (cnl strain): NMO_1906
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Entry
NMO_1906 CDS
T00954
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nmi
Neisseria meningitidis alpha14 (cnl strain)
Pathway
nmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMO_1906 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmi03021
]
NMO_1906 (rpoB)
03400 DNA repair and recombination proteins [BR:
nmi03400
]
NMO_1906 (rpoB)
Enzymes [BR:
nmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMO_1906 (rpoB)
Transcription machinery [BR:
nmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMO_1906 (rpoB)
DNA repair and recombination proteins [BR:
nmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMO_1906 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
CBA08472
UniProt:
C6S9G5
LinkDB
All DBs
Position
complement(2046222..2050400)
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSNG
VQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLGK
ALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTDE
TAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYE
DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLD
ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI
TLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYALQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaagcgggaaaat
gttttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagtttttgcag
ctggaaaatgcttttgacaaacgtaccgatgacggtctgcaggcggcatttaattctatt
ttcccgattgtgagccataacggttatgcgcgattggagtttgtgcattacacattgggc
gagcctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcccccttg
cgcgcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggtaaaagaa
gttcgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggttctttt
gtgattaacggcacagagcgtgtgattgtttcccagttgcaccgttcgcccggcgtgttt
ttcgagcatgacaaaggtaagacgcactcttccggcaaattgttattctccgcccgcatc
attccctaccgtggttcatggttggattttgaatttgatccgaaagatttgctgtatttc
cgtatcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttgggctacaac
aatgagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttcaaacggt
gttcaaaccgatttggtcgcaggccgtctgaaaggcgaaactgccaaggtcgatatcttg
gataaagaaggcaatgtattggttgccaaaggtaagcgcattactgcgaaaaatatccgt
gatattaccaatgcaggcctgacccgtttggatgtagaaccggaaagcctgctgggcaaa
gcattggctgccgatctgattgattcggaaaccggcgaggtattggcttctgccaatgat
gaaattacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaattacgacc
ctttacatcaatgagttggatcagggtgcttatatctccaataccttgcgtacggatgag
actgccggccggcaggcggctcgtgttgcgatttaccgtatgatgcgtccgggcgaaccg
cccactgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagacagctac
gatttgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaactgtcc
gaagcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggtgctgcc
gacaaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgactttggtc
gagttgcgtaacggccatggcgaagtggacgatatcgatcacttgggcaaccgccgagta
cgttcggtaggcgagctgactgaaaaccaattccgtagcggtttggcccgtgtggaacgt
gccgtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgatttgatt
aatgcaaaacctgtttctgccgctattaaagaattcttcggctccagccaattgagtcag
tttatggatcagaccaaccccttgtctgaagtaacccataaacgccgtgtatctgcattg
ggtccgggcggtttgacccgcgaacgtgcaggatttgaggtgcgggacgtgcatccgacc
cactacggccgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttgatcaac
tcattgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttaccgccgc
gttatcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaaggccgc
tatgtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggcgatttg
gttacctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaatatatg
gacgtggcaaccggccaggtggtatccgttgcggcatccctgattccgttcttggaacac
gatgacgcgaaccgcgcattgatgggtgcgaatatgcaacgtcaggcagtgccttgcttg
cgtcctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgactctgct
actgcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgtgttgtg
attcgtgtccatgacgacgaagcgactgccggcgaagtgggtgtcgatatttacaacttg
gttaaatttacccgttccaatcaatctactaacatcaaccaacgtccggctgtcaaagca
ggcgatgttttgcaacgcggcgatttggtggccgatggcgcgtccaccgatttgggcgaa
ttggctttgggtcaaaatatgactatcgccttcatgccgtggaacggttacaactacgaa
gactcgattctgatttccgaaaaagtggctgcggacgaccgctatacttcgattcacatt
gaagaattgaatgtcgttgcccgcgataccaagctgggtgcggaagacattacccgcgat
attccgaacttgtccgagcgtatgcaaaaccgtttggacgaatccggtatcgtttacatc
ggtgcggaagtagaagccggcgatgtgttggtaggcaaggtaacgcctaaaggcgaaacc
cagctgacgccggaagaaaaactgctgcgcgccatcttcggtgaaaaagcatctgacgta
aaagatacttcattgcgtatgcctaccggcatgagcggtaccgttatcgacgttcaagtc
ttcactcgtgaaggtattcaacgcgacaaacgtgctcaatccattatcgattccgagttg
aaacgctaccgtttggatttgaacgaccaattgcgtattttcgataacgacgcattcgac
cgtatcgagcgtatgattgtcggtcagaaagccaacggcggcccgatgaagctggccaaa
ggcagtgaaatcacgaccgaatatctggcgggtctgccgagcaggcacgattggttcgat
atccgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagcctgcaa
caaaaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacccaaggc
gacgaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaacgccgt
ctgcaagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcgcgcatt
ctgccagtggaagacatgccttacatggcggacggccgtccggtagacatcgtactgaac
ccattgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttgggttgg
gcagcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaagccagc
gagttgcgcgagttcttgaacaaactctacaacggcagcggtaagaaagaagatttggat
gccctgactgatgaagaaatcatcgaactggcctccaacctgcgcaaaggtgcatctttc
gcctctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgctgaacttggct
tatccgagcgacgatcctgaggttgaaaaactgggcttcaacgacagtaaaacccaaatc
acgctgtatgacggccgttcaggcgaagcatttgaccgcaaggttacagtaggtgtgatg
cactatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccg
tacagtctggttacccagcagcctttgggcggtaaagcccagttcggcggccaacgtttc
ggcgagatggaggtttgggcattggaagcatacggcgcggcatacgcgctgcaagagatg
ctgactgtgaagtctgacgacgtgaacggccgtaccaaaatgtacgaaaacatcgtcaaa
ggcgaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggtcaaagagatt
cgctcactgggcttggatatcgatttggaacgttactaa
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