KEGG   Neoehrlichia mikurensis: LUA81_02905
Entry
LUA81_02905       CDS       T08305                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nmik  Neoehrlichia mikurensis
Pathway
nmik03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nmik00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LUA81_02905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmik03019]
    LUA81_02905
Messenger RNA biogenesis [BR:nmik03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LUA81_02905
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B RNase_J_C Lactamase_B_2 DUF4453 Lactamase_B_6
Other DBs
NCBI-ProteinID: UTO56055
UniProt: A0A9Q9BQU0
LinkDB
Position
complement(717354..718985)
AA seq 543 aa
MNFNADSFLFIPLGGVGKIGMNVTLYHFQEKWIMVDLGAGFADTEIMPGINMIVADISFI
KKHRKNLLGIILTHAHEDHLGAVQYLWEDLRCPVYTTRFTAIFLKSKLKEFSLEVPIKEV
NTSQELVLKPFTIEFINMTHSIPEMHSLAIHTNVGSILHTGDWKLDNSPVIGPTSNVEKL
KQLGKNGLLAVVCDSTNIFTKGKSGSEGDLYNSLFNIIQNSTQRVAVSLFASNVARIYTF
IKISQQLDRHVVILGKSLIRIVQVAKDSGYLNDVPDFITQEQARQLPKNKVLYICTGCQG
EPLAATAKLSNNAHRMVTLESGDTIIFSSKIIPGNDKRIFNVFNRFVNMNVKVITEFMDH
VHVSGHPSRDDIITMYSLTNPKLCIPVHGEYIHMYEHAKVAQECGIKNHVIPNPGDVIDI
VLGKKIDSVQSGYFGVDGHFFHHPEGKVMSMRRKMKNAGIIIIILIMNKKNQLLKDPSII
APGVLDEIKDKALIKKVIKTINSKFYANKVQNIKSYIKNIVFNALKYDIQNVPVIEVQIE
YLL
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaattttaatgcagatagttttttattcatacctttaggtggagtaggaaaaataggt
atgaatgttactctataccattttcaagaaaaatggataatggttgatttgggcgcagga
ttcgctgataccgaaattatgccaggcattaacatgattgttgctgacattagttttata
aaaaaacatcgtaaaaatttacttggtattattctaacacatgctcatgaagatcatctt
ggagcggtacaatatttatgggaagatttaagatgtccagtatatacaacaagatttaca
gcaatatttcttaaatcaaaattaaaagaattctctttagaagttccaattaaagaagtg
aatacttctcaagaactagttcttaagccctttaccatagaatttataaatatgacacat
tctataccagaaatgcattcgcttgctattcatactaatgtaggaagcattttacacaca
ggagattggaaattagataactcgcctgtcattggtcctacctctaatgtggaaaaactt
aaacagcttggcaagaatggactattagcagttgtatgtgactcaacaaacatatttact
aaaggaaagtctggatcagaaggggatttatataatagcttgttcaatataatacaaaat
agtactcaaagagtagctgtatctttatttgcttctaatgttgccagaatttatacattt
attaaaatatcccaacaactagatagacatgtagtcatcttaggaaaatctcttatcaga
attgtacaagttgcaaaagacagcgggtatttaaatgatgtgccagattttataacccag
gaacaagcaagacaattgccaaaaaataaagtactttatatttgcacaggatgtcaagga
gaaccgcttgcagcaactgcaaaattatcaaataatgctcacagaatggttacgttagaa
agcggagatacaattattttttcgtctaaaattattcctggaaatgataagagaatattc
aatgtctttaatcgttttgttaatatgaacgttaaagtaataacagaatttatggatcat
gtacatgtatcaggccatccttcaagagatgatattattacaatgtattcacttaccaat
cctaaattgtgcataccagttcatggagaatacatacacatgtatgaacatgcaaaagta
gcacaagaatgcggtataaaaaatcatgttattcctaacccaggagatgttattgacata
gtattaggcaaaaaaatcgattccgtacaatctggttactttggcgttgatggccacttt
ttccatcatcctgaaggtaaagtaatgtcaatgcgtagaaagatgaaaaatgcaggtatt
attattataatactcattatgaataaaaaaaatcaattactcaaagacccatctatcatt
gcacctggagtattagacgaaataaaagataaagcactcataaaaaaagtaattaaaaca
ataaattctaagttttatgcaaataaagtacaaaatattaaaagttatattaaaaacata
gttttcaatgctctaaaatatgatatacaaaatgtaccagttattgaagtgcaaatagaa
tacttgctataa

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