Neisseria mucosa ATCC 19696: NM96_05695
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Entry
NM96_05695 CDS
T05436
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nmj
Neisseria mucosa ATCC 19696
Pathway
nmj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NM96_05695 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmj03400
]
NM96_05695 (recD)
Enzymes [BR:
nmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NM96_05695 (recD)
DNA repair and recombination proteins [BR:
nmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NM96_05695 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
T2SSE
AAA_16
FtsK_SpoIIIE
nSTAND3
SRP54
AAA_28
AAA
NTPase_1
DUF4147
TrwB_AAD_bind
AAA_5
UvrD_C
ATPase
Motif
Other DBs
NCBI-ProteinID:
AVR78896
LinkDB
All DBs
Position
complement(1146108..1147865)
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AA seq
585 aa
AA seq
DB search
MAENTADDLNLAAAQAAGHLLERCVPEHAAVLAPYVLRLFAALQNGHSFVWLDEGEAEEL
AGLAPTVGQSASPLVLQGKKLFLGRMWQLEHDLTAEIKRLAEAEVEPVDWMSASQNLSGW
FADKGSAGQRDAAGLALLQAFMLITGGPGTGKTTTVAKLLGLICTNSATRLPRIALAAPT
GKAAAHMARALHRAVDGFEMPDVVRNHLSALEGQTVHRLLKLRPPQMLPAFDGNHPLPLD
VLVVDEASMLDVSLLLHLLRAIPSGCRVIFLGDEFQLPSVGVGAVLAALSRRTVLDKGTA
EQLSIYLPEHGFPVEENPPALSQNVAQLTVSHRFGANSGIGCLARAVVSGKSGEGWAQFA
LFPNELEIREGRLKQQAELLYRKHEKYWQAVDKNDVALAFGHAADVVVLAAWRQDAEAFN
EEYCRYLQRKHRAGADTPWFAGQIIMIARNDYTLEVFNGDIGLIMPDAESANGLAAYFPN
ADGFKKIAISRLPQFDSAFAMTVHKSQGSEYREVWLLPPSGKIEQGGDDALSGLNNALLY
TAITRARERFVFWGNEEQWRMAVETRKTRRTALGDILDAMFVPKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaataccgccgatgatttgaaccttgccgccgcacaagcggccgggcatttg
ctggagcgttgcgtaccggagcatgctgcggtgctggcgccgtatgtgttgcggctgttt
gctgctttgcagaacgggcattcgtttgtttggctggatgagggcgaggcggaggaattg
gcgggattggcgccgacggtcgggcagagcgcgtcgccgttggtgttgcagggcaaaaag
ctgtttttggggcggatgtggcaactcgagcatgatttgacggctgaaatcaagcgtttg
gcagaagcggaagtcgagcctgtggattggatgagcgcgtcgcaaaacttgtccggctgg
tttgccgacaaaggcagcgcagggcagcgggatgcggcggggcttgccctgcttcaagcg
tttatgctgattacgggcgggccgggtacgggcaagacgacgactgtggcgaaacttttg
gggctgatttgcaccaactctgccacgcgcctgccgcgtatcgcgctggccgcgccgacg
ggcaaggcggcggcgcatatggcgcgcgcgctgcatcgggcggtggacggtttcgagatg
ccggatgtggtgcgcaatcatttgtccgcgctggaaggacagacggttcaccgccttttg
aaactgcgcccgccgcaaatgctgcctgcgtttgacggcaaccatccgctgcctttggat
gtgttggtagtggatgaggcttcgatgttggatgtttccctgctgcttcacttgctacgt
gcgattccgtcgggctgccgcgtgatttttttgggcgacgagttccaactgccttcggtc
ggcgtcggcgcggtattggcggcgttgtcgagacggacggttttggataaggggacggcg
gagcaactgagtatttatctgcctgaacacggtttccccgtggaggaaaatccgccggct
ttgtcgcaaaacgttgcgcaactgacagtcagccaccgtttcggcgcaaatagcggcatc
ggttgcttggcgagggcggtcgtatcgggcaagagcggggaaggttgggcgcagtttgcc
ttgttccccaacgagctggaaatccgcgaaggtcgtctgaaacagcaggcggagctgctt
taccgaaaacacgaaaaatattggcaggcagtcgataaaaacgatgtggcactggcgttc
ggacacgcggcggacgtggtcgttttggcggcatggcggcaggacgcggaggcgttcaac
gaagagtattgccgttatctgcaacgcaaacatcgggcgggcgcggatacgccgtggttc
gcgggacaaatcatcatgattgcgcgcaacgactatacgctggaagtgttcaacggcgac
atcgggctgattatgcccgacgcggaatcggcgaacggcttggcggcgtattttccgaat
gcggacggtttcaaaaaaatcgccatcagccgcctgccgcagtttgattccgcgttcgcc
atgactgtgcataaaagccagggttcggaatatcgggaagtctggctgctgccgccgtcg
gggaaaatagagcagggcggggatgacgcgctgtcgggcttaaacaatgcgctgctctac
accgccatcacccgcgcacgggaacgcttcgtcttttggggaaatgaagagcaatggcgg
atggcggtggaaacccgcaaaacccgccgcacggcattgggcgacatcttggacgcgatg
ttcgtaccgaaagcttga
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