Neisseria mucosa ATCC 19696: NM96_06425
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Entry
NM96_06425 CDS
T05436
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nmj
Neisseria mucosa ATCC 19696
Pathway
nmj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NM96_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmj03400
]
NM96_06425
DNA repair and recombination proteins [BR:
nmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NM96_06425
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NM96_06425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AVR79020
LinkDB
All DBs
Position
complement(1301779..1303806)
Genome browser
AA seq
675 aa
AA seq
DB search
MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA
QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA
INEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIA
TLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL
IQRIGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPSNAIMFIDESHVTVTQIGGMYKGD
ASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSATPAKYEEEHAGQVVEQVVRP
TGLVDPQIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY
LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL
IQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQMKFNEEHSIVPQQIKKQVKD
IIDGVYHEEDGGKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLR
DRIRGIKEGLLFGAE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcatccaatacccaaactcccccttcaaactccaccagcccttcccacccgcc
ggcgaccagcccaccgccattgccggcctgctcgaagggctttcagacggccttgcctac
caaaccctgctcggcgtaaccggttcgggcaaaacctacaccatggcgaacgtcatcgcc
caaagcggccgccccgccatcatcatggcgcacaacaaaacccttgccgcccagctttat
gccgaaatgcgcgagtttttccccgaaaacgcggtggaatattttgtttcctactacgac
tattaccagcccgaagcctatgtgcccagccgcgacctgttcatcgaaaaagacagcgcg
atcaacgaacacatcgagcaaatgcgcctttccgccaccaaaaacctgatgacgcgcgac
gacgtgattatcgtcgccaccgtgtccgccatttacggtatcggcgacccgaccgagtat
caacaaatggtgttgtccgtcaaagaaggcgacaccatcgagcagcgcgacatcatcgcc
acgctcgtttccatgcagtacgaacgcggcgatttggacttcaaacgcggcagcttccgt
gtgcgcggcgacgtgattgatgtgtatcctgctgaaagctccgaaaacgccttgcgtatc
agtctgttcgacgacgaaatcgaccgcctcgatatgttcgacccgctttcaggcagcctt
atccagcgcatcggccgctacaccgtcttcccttccagccactacgttaccccgcgcgac
accgtattgcgcgcctgcgagtccatcaaagaagaattgcgcgaacgcattgaatttttc
gcccgcgaacaacgccctgtcgaacaacaacgcatcgaacagcgcacccgcttcgacctc
gaaatgctctacgaaatgggcttctgcaaaggcatcgaaaactactcccgccacttctcc
ggcaaaaaagaaggcgaaccgccgcccacactgatggactacctgccaagcaacgccatc
atgttcatcgacgaaagccacgttaccgtaacccaaatcggcggcatgtacaaaggcgac
gcatcgcgcaagcaaaacctcgtggactacggcttccgcctgccttccgcccgcgacaac
cgaccgctcaaattccacgaatttgaaaaagtcatgccacaaaccgtcttcgtttccgcc
acccccgccaaatacgaagaagaacacgccggacaagtggtcgaacaagtcgtccgcccc
acagggctggtcgatccccaaatcatcatccgccccgttgccactcaagtagatgattta
atgagcgaaatcaacgaccgcatccaaaaaggcgaacgcgtactcgttaccaccctcacc
aaacgcatggcggagcaactcaccgactattacagcgaactcggcatcaaagtacgctac
ctgcacagcgacatcgacaccgtcgagcgcgttgaaatcattagagatttgcggctcgga
ctgtttgacgtactcgtcggcatcaacctcttgcgcgaaggcttggacatccccgaagtc
tccctcgtcgccatcctcgacgccgacaaagaaggtttcctgcgctcccaccgcagcctg
attcaaaccataggccgcgccgcgcgcaacgtgaacggcgtcgccatcctgtacgccgac
aaaatcaccgactccatgaaagccgccatcgacgaaaccgaacgccgccgcgaaaaacag
atgaaattcaacgaagaacacagtatcgtgccgcagcagattaagaaacaggtcaaagac
atcatcgacggcgtgtaccacgaagaagacggcggcaaaggtcgtctgaaaggcaaaaat
aaagttaaagttggagaaatccacaacgaagaagacgcaattaaagaaatcgccaaactg
gaaaaagccatgcagcaggcggctagggatttgcagtttgaagaagcggcagtgttaagg
gataggattcgggggattaaggaagggttgttgtttggtgcggagtga
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