Neisseria mucosa ATCC 19696: NM96_08075
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Entry
NM96_08075 CDS
T05436
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nmj
Neisseria mucosa ATCC 19696
Pathway
nmj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NM96_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmj03400
]
NM96_08075
Enzymes [BR:
nmj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NM96_08075
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NM96_08075
DNA repair and recombination proteins [BR:
nmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NM96_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Prot_ATP_ID_OB_N
Motif
Other DBs
NCBI-ProteinID:
AVR79294
LinkDB
All DBs
Position
complement(1607202..1608029)
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AA seq
275 aa
AA seq
DB search
MPELPEVETTLRGISPHIQGKKVADVVLRQTKLRWQVNPQLAELLAGQEVLSCRRRAKYL
VIGFATGILLIHLGMSGSLRIFTDGDARIDHPDKHDHADIVFADGTVLRYHDPRKFGAIL
WYEGIAEHHPLLEKLGPEPLSDDFSADYLYQKLKTQKRAVKLALMDNAVVVGVGNIYANE
SLFKSGISPTRPADKVKKKECVVLVETVKAVLQRAIETGGSTLRDFVNSDGKSGYFQQEY
TVYGRHNEPCVRCGGLVQKEVLGQRGTFYCPNCQK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgaggtggaaacgacgttgcgcggtatcagcccgcatattcaaggt
aaaaaggtggcggatgtcgtgttgcgccaaaccaagctgcgctggcaggtcaatccgcag
ttggcggagcttttggcggggcaggaggtgttgagctgtcgtcggcgggcgaaatatttg
gttatcggttttgcaacgggtatcttgttgattcatctaggcatgtcgggcagtctgcgg
atttttacggacggcgatgcgcggattgaccatcccgacaaacacgaccatgcggacatt
gtgtttgcggacggaacggtgttgcgctatcacgacccgcgtaagttcggcgcgattttg
tggtatgaaggcattgcggaacatcatccgctccttgaaaaactgggccccgagccgctt
tcagacgacttctccgccgattatctgtatcaaaagctcaaaacgcaaaaacgtgcggtc
aaattggctctgatggacaatgccgtcgtggtcggtgtaggcaatatttatgcgaacgaa
agcctatttaaatcaggcatatcgccgacccgtcctgcggacaaggttaagaaaaaagaa
tgcgttgtgttggtagagacggtcaaggcagtgttgcagcgcgcgattgaaaccggcggc
agcacgttgcgcgacttcgtcaacagcgacggcaaaagcggctattttcagcaggaatat
acggtgtacggcaggcacaacgaaccctgcgtccgttgcggcggtttggtgcagaaggaa
gttttggggcagcgcgggacgttttattgtccgaactgccaaaaataa
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