Neisseria mucosa ATCC 19696: NM96_11100
Help
Entry
NM96_11100 CDS
T05436
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nmj
Neisseria mucosa ATCC 19696
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmj03016
]
NM96_11100
Enzymes [BR:
nmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NM96_11100
Transfer RNA biogenesis [BR:
nmj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NM96_11100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AVR79797
LinkDB
All DBs
Position
complement(2201246..2203108)
Genome browser
AA seq
620 aa
AA seq
DB search
MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPPEIAADLKTILHAPDKQSLTYKAF
TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPSLAVKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSEFNVGEPTCKIEAVNIAENLRIQAIEP
HFNAETGLDEAGEMMFAHHQDLIWLHQFAVALQKARGKYEPDRAPQYDYSIELDEEGNVS
VVRRERGSPIDTLVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLLSLIDDTAETLYQNSDAELFAALRDFDTAYTAYADFQR
QMEAYWSLVYLQQQGTNELTATILKEDLVRIEGLPLVTRATGILFDALPKSQVLLKITEL
DPEKQFIALNYVKAVAPAVA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccagttcaaagtcgccgccatcgtccaaaaaaac
gacgccacttaccaagtcgatacccaacacggcaagcgcaccaaagtgaaggcgaataat
gtctttgccgagttcgacggcgatatggcggcgtttttggagaacgcgcaggcgcaggcg
gcggacatcgacaccgatttattgtgggaagtatgcggcgaagaagaattttccgccgag
gcgatcgccgaagaatattacggtcatgcgccgaccaaaaccgagctggcggcaaccttg
attgcgctttacgctgcgccgatgtatttctacaaaaaagccaaaggcgtgttcaaagca
gcgccagaagagaccttaaaacaagcgcttgccgccatcgaacgcaaaaaacagcaagac
gcgcaaatcgacgcttgggcggaagccttgaaacgcggcgagatgccgcctgaaatcgcg
gcggatttgaaaaccatcctgcacgctcccgacaagcagtcgctgacctacaaagccttt
accaaagccgccgacgcgctgaaaacctccgcctatgaattggcgaaaaagacaggcggc
attacgtccattccccaatatctgcaagacgggtttgaaatcaaatacttccccaaagga
acaggtttccccgacctcccccttcctgaaatgcccgacctgcccaaggccgacgttacc
gccttttccatcgacgacgaatcaaccaccgaagtggacgacgccttgagcctgaccgac
ttgggcaacggcacgaaacgcgtcggcatccacatcgccgcgccgtcgcttgccgttaaa
ccgggcgacaaaatggaaaaaaacatcatggaacgcttgagcacggtctattttcctggc
ggcaaaatcaccatgctgcccgaaaactggattgccgcgttcagcctcgatgcgggcgcg
taccgtcctgccgtcagcatttatttcgatgtggacagcgaattcaacgtcggcgagccg
acctgcaaaatcgaagccgtcaacatcgccgaaaacctgcgcatccaagccatcgagccg
catttcaacgccgaaaccggcttggacgaagccggtgaaatgatgttcgcccatcatcaa
gacctgatttggttgcaccaatttgccgtcgccctgcaaaaagcacgcggcaaatacgaa
cccgaccgcgcgccgcaatacgattacagcatcgaattggatgaggaaggcaacgtatcc
gtcgtccgccgcgaacgcggttcgcccatcgatacgctggtcagcgagatgatgatactc
gccaacagcacttgggcgcagatgctccatgataacgacctgcccggcctcttccgcgtg
caacccgccggaaaagtgcgcatgagcaccaaatccgagccgcacatcggcatgggcgta
cagcattacggctggttcacctcaccgctgcgccgcgccgccgactacatcaaccaaaaa
caactcctcagcctgatagacgacactgccgagacgctgtaccaaaacagcgatgccgag
cttttcgccgcgctgcgcgacttcgatactgcctatacagcctacgccgacttccaacgc
caaatggaagcctactggagcctcgtgtacctgcaacagcaaggcacgaacgagctgacg
gctaccatcctcaaggaagacctcgtccgcattgaggggctgccgctggtaacgcgcgcg
accggtattctgtttgacgcgctgcccaaatcgcaagtcctgctcaaaatcaccgagctt
gatccagaaaagcagtttatcgcgctgaactatgtgaaagccgtcgctcctgcggttgcg
taa
DBGET
integrated database retrieval system
