Neisseria mucosa ATCC 19696: NM96_12025
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Entry
NM96_12025 CDS
T05436
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nmj
Neisseria mucosa ATCC 19696
Pathway
nmj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NM96_12025 (hrpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmj03041
]
NM96_12025 (hrpA)
03009 Ribosome biogenesis [BR:
nmj03009
]
NM96_12025 (hrpA)
Enzymes [BR:
nmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NM96_12025 (hrpA)
Spliceosome [BR:
nmj03041
]
Complex A
U2 snRNP components
U2 related factors
NM96_12025 (hrpA)
Complex B
NM96_12025 (hrpA)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NM96_12025 (hrpA)
Ribosome biogenesis [BR:
nmj03009
]
Eukaryotic type
90S particles
Helicases
NM96_12025 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
AAA_23
nSTAND3
ABC_tran
NACHT
AAA_30
ResIII
AAA_11
T2SSE
RsgA_GTPase
SRP54
SLFN-g3_helicase
PhoH
cobW
AAA_29
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AVR79946
LinkDB
All DBs
Position
complement(2375569..2376966)
Genome browser
AA seq
465 aa
AA seq
DB search
MPHPDLSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAALPKPEFDNTL
PVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS
VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIID
EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVE
ILYRPLTSKDEDDAEVELTDAIVDAADELARYGEGDILIFLPGEREIREAAEALRKSTLR
RNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRY
SARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRPEFTDPEIVRSNLA
AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEEVV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccccatcccgacctctcccaaaccctctccaaagaccgccacttcctgcaatccgcc
ttcaaaaatcccaacaaatacggcggcttgtccaaagtcgaagaaaaataccgaaaatcg
cacgaaatctttttgaagcgtttggccgccttgcccaaacccgagttcgacaacaccctg
cccgttcacgagaagctcgaagaaatcaaaaaagccattgccgaaaatcaggtaacgatt
atttgcggcgaaaccggttcgggcaaaaccacgcagttgcccaagatttgtctggaactc
gggcgcggggcggcggggctgatcgggcatacccagccgcgccgtttggccgcgcgttcg
gtggcggagcggattgccgaagagttgaaatccgaaatcggcagcgcggtgggctataag
gtgcgttttaccgaccacacctcgcgcgatgcctgcgtcaagctgatgaccgacggcatc
ctgctggcggaaacgcagaccgaccgttatctcgccgcctacgacacgattatcatcgac
gaagcgcacgaacgcagcctgaacatcgacttcctgctaggctacctgaaacagctcctg
ccgcgccgccccgatttgaaagtcatcatcacctcggcaaccatagacgcagaacgcttc
tcccaacacttcaacggcgcgcccgtgctggaagtgagcgggcgcacctatcccgtcgaa
atcctctaccgaccgctgaccagcaaagacgaagacgatgcagaagtcgagctgaccgac
gcgattgtcgatgcggcggacgaattggcgcggtatggcgaaggcgatattttgatattc
ctgccgggcgaacgcgaaatccgcgaagccgccgaagccctgcgcaaatccacgctgcgc
cgcaacgacgaaatcctgcccctgttcgcgcgcctatcgcacgccgaacagcacaaaatc
ttccacccctcaggcgcgaaacgccgcatcgtactggcaaccaacgtcgccgaaacctcg
ctcaccgtgccgggcatcaaatacgtcatcgacaccggcctcgcgcgcgtcaaacgctat
tccgcacgggcaaaagtggagcagcttcatgtcgaaaaaatctcccaagccgccgcccgc
caacgctccggccgctgcggacgcgtctccgcaggcgtgtgtatccgcttattttcagaa
gaagatttcaacagccgccccgaattcaccgaccccgaaatcgtccgcagcaacctggcc
gccgtcatcctacgcatggcagcgttgaaactcggcgacgtggcggcattcccgttttta
gaaatgcccgattctcggtatatcaatgatgggtttcaggtgttattggaattaggggcg
gtggaggaggtcgtctga
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