Neisseria mucosa ATCC 19696: NM96_13175
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Entry
NM96_13175 CDS
T05436
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nmj
Neisseria mucosa ATCC 19696
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nmj03009
]
NM96_13175
Enzymes [BR:
nmj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NM96_13175
Ribosome biogenesis [BR:
nmj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NM96_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Methyltrans_SAM
PrmA
UPF0020
Methyltr_RsmB-F
PCMT
Methyltransf_11
RrnaAD
Methyltransf_32
Cons_hypoth95
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AVR80356
LinkDB
All DBs
Position
2602509..2603885
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AA seq
458 aa
AA seq
DB search
MPCRAKWIFLMKMRTDNRQYESEADIFSLDYEGRGVARVNGKALFIEGAIPGERVRFEII
RSKKQFDEARVIDITRYSENRVEPKCRYFDTCGGCSIQHIDSTAQIAFKQRIMEEQLERI
GKIRPKQILPAIYGTPWHYRERARLSISKDAGGRLKIGFKAKKSHEVIDVDSCMVLPAHI
SEKLPKIKQMLQSLIDLDLLFIEFFNSEKLTVLNICSGKKPPSQKLRQLEKWFDTIFGHE
KKQWQIWLQARRQEAQPFYPKDCQPLGYALPEFEVEMPYKPGDFTQINAGLNGVMVGRAL
KLLDIQKNERIADLFCGLGNFSIPMAKSGAEVVGIEGEGSLVKRARNNASANGCSDRVSF
FEADLFETDEVVVASWGQFDKMLLDPPRGGAYAVVKSLHAPYLPVRIVYVSCNPATFARD
AEVLVNKGYKLKLAGVMNMFAQTSHVESIGVFDLENSI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgccctgtcgggcaaaatggattttcttgatgaagatgcggacagataacaggcaatat
gagagcgaggcggatattttttctttggattatgaaggaagaggtgtcgcgcgcgttaat
ggtaaggcattgtttattgaaggagcgataccgggtgagcgggtgcggtttgaaatcatc
cgttcgaaaaaacaatttgatgaagcacgggtcattgacattacccgatattcggaaaat
cgagttgagccgaagtgtaggtattttgatacatgcggtggttgttcaatacagcacatt
gattcgacagcccagattgcatttaaacaacgcattatggaagagcagttggaacgcatc
ggcaaaatccgacccaagcagattctcccagctatatatggaacaccatggcattatcgg
gagcgtgccagactgagtatttcaaaggatgcaggtggtcgtctgaaaatcggttttaag
gcaaaaaagagtcatgaagtgattgatgtcgattcatgtatggtgttgccggctcatatt
tctgagaagttgccaaaaataaagcaaatgttgcaaagtttgatagatttggatttgcta
ttcattgagttttttaatagcgaaaaactaacggttttgaacatttgttccggaaaaaaa
ccgcctagtcaaaaattgagacaacttgaaaaatggtttgatacgatattcggtcatgag
aaaaaacagtggcagatttggctgcaagcccgaagacaggaggcccagccattctatccg
aaagattgtcagcctttgggatatgctttacctgagtttgaggttgaaatgccgtacaaa
cccggggattttacccagattaatgcaggcttaaatggagtgatggttggcagggctttg
aaacttctagatattcagaaaaacgagcgtattgcagatttgttttgcgggcttggaaac
ttcagtattcctatggcaaaaagcggggctgaggtagttggaatcgaaggtgaaggttcg
ttggttaagcgagcacgaaacaatgcttcggctaacggttgttccgatagggtatccttc
tttgaagcggatttgtttgaaacagatgaggttgtggtagcgtcatggggtcaattcgac
aagatgttgcttgatcccccgagaggcggtgcctatgctgttgtcaaatcactacatgct
ccgtatttgccggtaaggatagtatatgtttcttgcaatccggcaacctttgccagagat
gcggaagtgctggtaaataagggctataagctgaaattggcaggggtaatgaatatgttt
gcacagacttcgcatgtcgaatctataggtgtcttcgatttggaaaatagtatatag
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