Neobacillus mesonae: CHR53_05805
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Entry
CHR53_05805 CDS
T06691
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nmk
Neobacillus mesonae
Brite
KEGG Orthology (KO) [BR:
nmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmk03016
]
CHR53_05805
Enzymes [BR:
nmk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CHR53_05805
Transfer RNA biogenesis [BR:
nmk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CHR53_05805
Prokaryotic type
tRNA splicing ligases
CHR53_05805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
HP0268
Motif
Other DBs
NCBI-ProteinID:
AZU60819
UniProt:
A0A3T0HUN1
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All DBs
Position
1232789..1234009
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AA seq
406 aa
AA seq
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MIRVTGSQTEAKVFSNYPQETAIEQIQELCNQTFLKDTKISIMPDYHAGKGCVIGTTIQL
KDKVVPNLVGVDVGCGVLTTKLKEKNIDFNKLDQVIRTYVPSGQGIHDKETVKLVKTSFP
AAEEFKAAHILSQNKSHSSLGTLGGGNHFIEVSVDSDSYHYLTIHTGSRYVGARIATYYQ
KLAISKHRKHDLSEMIAQLKKEGRHKEIQDAIENHKEKNPVIPDDLAYLEGTDFDDYIYD
MKLAQAFAKANREEIARTISENMKFDIVDQFDTVHNYIDTDNLILRKGAVSAQKGERLII
PINMRDGSILAIGKGNEEWNYSAPHGAGRVLSRTKAMKTLNMEDFHNTMKGIWTTSVSKE
TLDEAPMAYKPMNEILEKVGETVEIASFIKPIYNFKASEKPSRYRK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgatacgagtaacgggatcgcagacagaagcaaaggtattttccaattatccacaggaa
acggcgattgagcagattcaggagctgtgcaatcaaacgtttttgaaggataccaaaatt
agtattatgccagactatcatgctgggaaaggctgcgtcattggcacgaccatacagctt
aaggataaggttgtcccgaacctagttggcgttgatgtcggatgcggggttttaacaacg
aaattaaaggaaaaaaacattgattttaataagctggatcaggtcattcgaacctatgtc
ccaagcgggcaggggattcatgataaggaaaccgttaaactcgtaaaaactagttttcca
gccgcagaggaatttaaagccgcgcatattttaagccaaaataaaagccattccagcctg
ggaacgctcggaggcggaaatcattttattgaggtatcagtcgattctgacagttatcat
tatttaaccatccataccggcagccgttacgttggagcgagaattgcaacctattatcaa
aaactagcaatctcaaagcaccgaaagcatgacttatcggaaatgatcgcccagttaaaa
aaggaagggcggcataaagaaattcaagatgcaatcgaaaatcacaaagaaaaaaatcct
gtcattccagatgatttagcctatttggaaggaacagattttgatgattatatttatgac
atgaagctggcccaggcatttgcgaaagcaaatcgtgaagaaattgccaggacaatctcg
gaaaatatgaaatttgacatcgttgaccaatttgatacggttcacaattatatagatacg
gacaatttgattttgcggaaaggggcggtttccgcgcaaaaaggtgagcgcctaatcatt
ccaattaacatgagggacggatcgattttggccatcggaaaaggtaatgaagagtggaac
tattccgcgcctcatggggccggccgcgtcttaagccggacgaaggcaatgaaaaccttg
aacatggaagatttccataacacaatgaaaggcatttggacgacatccgtttctaaagag
acacttgatgaggcgccaatggcctacaagccgatgaatgaaatccttgaaaaagtcgga
gaaacagtcgaaatcgccagcttcatcaaaccaatttataactttaaggccagtgaaaaa
ccaagtagatatcgtaaataa
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