Neobacillus mesonae: CHR53_19040
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Entry
CHR53_19040 CDS
T06691
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nmk
Neobacillus mesonae
Pathway
nmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHR53_19040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmk03019
]
CHR53_19040
03400 DNA repair and recombination proteins [BR:
nmk03400
]
CHR53_19040
Enzymes [BR:
nmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHR53_19040
Messenger RNA biogenesis [BR:
nmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHR53_19040
DNA repair and recombination proteins [BR:
nmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHR53_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SpoIVA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AZU63184
UniProt:
A0A3T0I1G3
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All DBs
Position
complement(3884813..3886318)
Genome browser
AA seq
501 aa
AA seq
DB search
MELEKLLKKYFGYSTFKTGQKEVISAIINGEHTLAMLPTGTGKSLCYQLPGYIFEGQILI
ISPLLSLMQDQVEQMKRLGEKRVVALNSFLSHQEKEEVLRVLNKYKFIFISPEMLRVPYI
IKRLQGLSLSLFVVDEAHCISQWGYDFRPDYSKLGEIRKLLGSPLTLALTATATVKVRQD
IIQSLGLTKVTKVESTIDRPNIAFYVEEIADYRDKEKRILALVNELQKPGIIYFSSKKAA
EHMADLLANELNFRSSVYHGGLEQDTRILIQQQFIHNQLDIICATSAFGMGVNKGNIRFV
IHYHMPMQMESYLQEIGRAGRDGAPSIAILLYSPGDEQLPIQLAEAELPSEQQIDWLFSR
PDFNQMTSDRAFVLSETLKELGGFNEVQGRIIEELVNRSNQEISSLQLKEFVKGFTKKRL
QAKRNHIFQMKQWVEVKNCRRKYIMEYFDDRLATDVNLCCDRCGLDLTHFHSANAHQLLD
AGDGTWIEYLRKLLFNSEMSK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaattagagaaattattaaaaaaatatttcggatattcgacttttaagacaggacaa
aaggaagtcatttcggcaattataaatggagagcatacattagccatgctgcccacggga
acggggaaatcattatgctaccagctgccaggatatatctttgaggggcaaatattaatt
atctcaccgcttctttcgcttatgcaggatcaagtggagcaaatgaaacggctgggagaa
aagcgggtcgttgccctgaattcatttcttagccatcaagaaaaagaagaggtgctaagg
gtattaaataaatataaatttatttttatttcaccagaaatgctgcgtgttccttatatt
ataaaaagacttcaaggcttatccctttctttatttgtcgttgatgaagcccattgtatt
tcccaatggggttatgactttcgcccggactattccaaattgggggagattcgaaagctg
ctcgggagccctttgacacttgccttgacggcaacagcaaccgttaaggtgcgtcaagat
attattcaatcgcttggactgacaaaggtgacaaaagtagaatcaacgatagaccgaccc
aatatcgcgttttacgtagaagagattgcagattatcgtgataaagaaaaacggatcctt
gcccttgttaacgaactgcaaaagccaggtatcatttatttttcaagtaagaaggctgca
gagcacatggcagatcttcttgcaaatgagctgaactttcgctcaagtgtttatcacggt
ggtttagaacaagatacaagaatattgattcaacagcaatttattcataatcagctcgat
atcatttgtgcaacgagtgcatttggtatgggagttaataaaggcaatatccgatttgtt
atccactatcacatgccgatgcaaatggaatcctatttacaggagattggcagagcgggg
cgtgatggcgccccaagcattgcaatcttattatattcaccgggagacgaacagctgcct
atccaattggccgaagcggaattgccttcagagcagcaaattgattggttgttttccagg
cctgatttcaaccagatgacatctgacagagcatttgtgctgtctgaaacattaaaagag
cttggtggtttcaatgaggtacaaggtaggattatcgaggaattggttaatcgttctaac
caagagataagcagtttgcagttaaaagaattcgttaaaggttttacgaaaaaaagatta
caagcaaaaagaaatcatatttttcaaatgaagcagtgggttgaagtaaaaaactgcaga
cgtaaatatattatggaatattttgatgaccgtttagcaacagatgttaacctatgctgt
gatcgatgcggcttggatttaactcattttcactcggctaatgctcaccagctgcttgat
gcaggtgacggtacatggatcgaatatctgcggaaactattattcaatagcgagatgagt
aaatga
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