Neobacillus mesonae: CHR53_23135
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Entry
CHR53_23135 CDS
T06691
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
nmk
Neobacillus mesonae
Pathway
nmk02020
Two-component system
nmk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CHR53_23135 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHR53_23135 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmk03021
]
CHR53_23135 (rpoN)
Transcription machinery [BR:
nmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHR53_23135 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
MarR_2
HTH_3
wHTH_Par
HTH_Tnp_Tc3_2
MarR
HVO_A0261_N
Xre-like-HTH
HTH_Crp_2
HTH_6
HTH_20
HTH_11
HTH_24
Fe_dep_repress
Pkip-1
Usp-48
HTH_IclR
HTH_5
LexA_DNA_bind
HTH_21
PF0610-like_N
YonG_N
Motif
Other DBs
NCBI-ProteinID:
AZU63911
UniProt:
A0A3T0I3J5
LinkDB
All DBs
Position
complement(4693649..4694971)
Genome browser
AA seq
440 aa
AA seq
DB search
MNLKAGLWQQQTLKLAMTQELSQAIALLQYSAQELSEFLENKALENPLLQIENVNVQPMN
PLIDRNRKKHQKAEKNWIEQIAAKSFSLEEQLLSQLNIKALSREQLRVIRYLIQHLDENG
YLADDLHEIASKLKISSELAENCLLMIQSLEPVGIGARNLQECLLIQVEYEDPDNELAKR
ILTDYFVPFAEKKWKQIAKELQVSLKDIQTVFDEIQLLNPKPGAMLGRETSAYIIPDVII
EQTVEGLTVRMFDDTIPKITFNDQYFNKFKDKDQQVSRFLQDKLQDYQWILKSIEQRRET
LTRVVAKIVEKQTAFFQKGPQNLVPMTMKELAAELDIHESTVSRAVREKYVQTPIGTFTL
KSFFTSTIQTVSGDENTSSTQVKNAISKLIDNENKEKPLSDQDIVEQLKTAEGIVVSRRT
IAKYRDQLGIPSSSKRKRFN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaagcaggtttatggcagcagcagacgctcaagctggcgatgacccaggag
ctgtctcaggcaattgctttattgcaatactcagctcaagaattgagtgagtttttggaa
aataaagcactcgagaatcctttattacaaatagagaatgtcaatgtgcagccaatgaat
cccctgattgaccgaaatcggaaaaagcatcaaaaggcggaaaagaattggattgaacaa
atcgctgcaaaatcattttcacttgaagagcaattactatcacaattaaatataaaagct
ttatctagggaacaattacgagttattcgctatttaatccagcatttggatgaaaacggt
taccttgctgatgatctgcatgagattgcgtcaaagctgaaaattagcagcgagctggcc
gaaaattgtttactaatgattcaatcgctcgagccagtagggattggagcacgaaatttg
caggagtgtctgctcatccaagtagaatatgaagatcccgataatgagctggcaaaaaga
attcttacagactatttcgtcccgtttgctgagaagaagtggaagcaaatcgccaaggag
ctgcaggtgtcattaaaggatattcaaactgtattcgatgaaatccaattattaaatcca
aaaccgggcgccatgttaggccgtgaaacatctgcttacattattccagatgtgattatt
gaacaaaccgttgagggcttgaccgtccgtatgtttgacgatacgattcctaaaattaca
tttaatgaccaatattttaataaatttaaggacaaggaccagcaggtaagccgtttttta
caagataagctgcaggattaccaatggatcttaaaaagtattgaacagcgccgggaaaca
ttaacgagggtcgtcgctaaaattgtcgagaagcaaacggcctttttccaaaaggggccg
caaaatttagtgccgatgacaatgaaggagctggctgctgagctggatatccacgaatca
accgtgagccgggctgtccgtgaaaagtacgtgcagacaccaattggcaccttcacattg
aagtcgttttttacaagcacaatccaaaccgtctcgggggatgaaaatacctcatccact
caggtgaaaaacgccatcagcaagctgattgacaacgaaaacaaagaaaagccattatcc
gatcaggacatcgtggaacaactaaaaacagcagaaggaatcgttgtatcacgccgaacc
atcgccaaataccgcgaccagcttggcatcccgtcctcctcaaaacggaaacggtttaac
tag
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