Nakamurella multipartita: Namu_1064
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Entry
Namu_1064 CDS
T00991
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nml
Nakamurella multipartita
Pathway
nml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Namu_1064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nml03021
]
Namu_1064
03400 DNA repair and recombination proteins [BR:
nml03400
]
Namu_1064
Enzymes [BR:
nml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Namu_1064
Transcription machinery [BR:
nml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Namu_1064
DNA repair and recombination proteins [BR:
nml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Namu_1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ACV77472
UniProt:
C8XBL0
LinkDB
All DBs
Position
1180219..1184145
Genome browser
AA seq
1308 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYLITAVDETARHNDLPTIEAEMGVERKNLENARDADIDARAKKLEAD
LAELEAEGAKSDVRRKVREGGEREQRQIRDRAQRAIDRLDEVLDLFRKLSVRQLIVDEVL
YRELEDRFGDYFTGGMGAEALKQIISDFDIDAEVEILRDTIKNGKGQRKIRAIKRLKVVA
AFQMTQNSPLGMVLDCVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVISAHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHVPLSSEAQAEARVLMLSSNNILSPGSGRPLAMPSLDLVTGLYYLCGYKPEAKGAGS
VFSSPAEGIMALDAGLIDLRAPIKVRLPGSVKPSKDTLAALGEDYEAGQPWLAETTLGRV
LFNELLPDGYPFVNEELPKKRQAVIVNDLAEHYPMSVVAQVLDRLKEAGFHWATRSGMTV
AIGDVIIPPEKEEILLRHEIEAERVEKAYQRGNLSHEERNDDLVKIWEAATREIEEALPP
AYPADNPVSTLVNAGAAGNWIQVRSLAGMKGVVANSKGQQIPRPIRSSFREGLSVLEYFI
NTHSARKGLADTALRTAESGYLTRRLVDVSQDVIVRETDCGTERGVTLPMADRYADGSLH
INEFIETSVQGRVLAGDLVAEDGTVVVPAGTDMREHHVRDAVNAGITLAKVRSVLTCEAA
IGTCAVCYGRSLATGNLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGAASGSSDITQGLP
RVQELFEARVPKGKAPIADAAGRIRIEDADKFFKIIVTPDDGSEEIVYEKLPKTQRLATM
TVDGSERLLVDGDHVSVGQQLLEGNPDPHEVLRVMGQREVQLHLVREVQNVYRSQGVGIH
DKHIEVIIRQMLRRVTIIDSGSTEFLPGAVIERKEFEASNRRVLAEGGEPAAGRPALMGI
TKASLATESWLSAASFQETTRVLTDAAINAKSDKLVGLKENVIIGKLIPAGTGIARYRDI
QVQPTEEARAAAYTLPSFDDTYYGADTFGVATGAAVPLDDFDLGRDYR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagttgcgtatcggtctcgccaccgccgacgacatc
cgcgcgtggtcccacggcgaggtcaagaagccggaaaccatcaattaccgcacgctcaag
ccggaaaaggacgggctcttctgcgagaagatcttcgggccgacccgggactgggagtgc
gcctgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccgcgccaaggtgcgtcgcgagcggatgggccacatcgagctggccgcaccg
gtcacccatatctggtacttcaagggcgtcccgtcgcgcttgggctacctgctcgacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacctgatcaccgcggtcgac
gagacggctcggcacaatgacctgccgaccatcgaggccgagatgggcgtcgagcgcaag
aacctggagaacgcgcgggacgccgacatcgacgcccgggccaagaagctcgaggccgac
ctggccgagctggaggccgagggcgccaagtccgacgtgcgccgcaaggtgcgcgagggc
ggcgagcgcgagcagcggcagatccgcgaccgtgcgcagcgggccatcgaccgcctcgac
gaggtgctcgacctgttccgcaagctctcggtgcgccagctgatcgtcgacgaggtgctc
taccgcgagctggaggaccgcttcggcgactacttcaccggcggcatgggggccgaggcg
ctcaagcagatcatctcggacttcgacatcgacgccgaggtcgagatcctgcgcgacacc
atcaagaacggcaagggccagcgcaagatccgcgcgatcaagcggctcaaggtcgtcgcg
gcgttccagatgacgcagaactcgccgctgggcatggtgctggactgcgtgccggtgatc
ccgccggagctgcggccgatggtgcagctggacggtggccggttcgccacctccgacctc
aacgacctgtaccggcgcgtgatcaaccggaacaaccggctcaagcgactgatcgatctg
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ttgttcgacaacggccgccgtggccgtccggtcaccgggccgggcaaccgcccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgccagaacctgctgggcaag
cgtgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcggcagcgg
ccgcaggtgtgggacgtcctggaagaggtcatctccgcgcacccggtgatgctgaaccgg
gcgccgaccctgcaccgcctgggcatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtctgtgccgcgttcaacgccgacttcgacggcgaccag
atggccgtgcacgtgccgctgtcgtccgaggcgcaggccgaggctcgcgtgctgatgctc
tcgagcaacaacatcctgtccccgggttcgggccggccgctggccatgccctcgctggac
ctggtgaccggcctgtactacctgtgtgggtacaagccggaggccaagggggccggctcg
gtgttctcctcgcccgccgaggggatcatggcgctggacgccggactgatcgatctgcgc
gcgccgatcaaggtgcggctgcccggttcggtcaagccgtcgaaggacaccctggctgcg
ctgggagaggactacgaggcgggccagccctggctggccgagaccacgctgggccgggtc
ctgttcaacgagctgctgcccgacgggtacccgttcgtgaacgaggagctgcccaagaag
cggcaggccgtcatcgtcaacgatctggccgagcactacccgatgtccgtggtggcgcag
gtgctggaccgcctgaaggaggcgggcttccactgggcgacccgctcgggcatgacggtg
gccatcggtgacgtcatcatcccgccggagaaggaagagatcctgctccgtcacgagatc
gaggcggagcgggtcgagaaggcctaccagcggggcaacctctcccacgaggagcgcaac
gacgacctggtcaagatctgggaggcggccacccgggagatcgaggaggcgctgcctccg
gcgtacccggccgacaacccggtgtccaccctggtgaacgccggcgccgccggtaactgg
atccaggtccggtcgctggccggcatgaagggtgtggtggccaactccaagggtcagcag
atcccgcggccgattcgctcctcgttccgcgagggcctgtcggtgctggagtacttcatc
aacacccactcggcccgtaagggtctggccgacaccgcgctgcgaacggcggagtcgggc
tacctgacccgtcgtctggtcgacgtgtcgcaggacgtcatcgtgcgcgagaccgactgt
ggcaccgagcgtggcgtcaccctgccgatggccgatcggtacgccgacggcagcctgcac
atcaacgagttcatcgagacctcggtgcagggtcgggtgctggccggtgacctggtcgcc
gaggacggcacggtcgtcgtgccggccggtacggacatgcgcgagcaccacgtgcgggac
gcggtcaacgccgggatcaccctggccaaggtccgttccgtgctgacctgcgaggcggcc
atcggcacctgtgcggtctgctacggccgctcgttggccaccggcaacctggtggacgtg
ggcgaggccgtcggcatcgtggccgcgcagtccatcggtgagcccggcacgcagctgacc
atgcggaccttccacaccggggcggcgtcgggttcctccgacatcacccagggtctgccg
cgtgtgcaggagctgttcgaggcccgggtccccaagggcaaggcgccgatcgccgacgcc
gccggccggatccggatcgaggacgccgacaagttcttcaagatcatcgtcaccccggac
gacgggtcggaggagatcgtgtacgagaagctgcccaagacgcagcggctcgcgacgatg
accgtcgacggctccgagcgtctgctggtggacggcgatcacgtgtcggtcggccagcag
ctgctcgagggcaacccggatccgcatgaggtgctgcgggtcatgggccagcgcgaggtg
cagctgcacctggtgcgagaggtgcagaacgtgtaccgctcgcagggcgtgggcatccac
gacaagcacatcgaggtgatcatccggcagatgctgcggcgggtcacgatcatcgactcc
ggctcgaccgagttcctgccgggtgcggtgatcgagcgcaaggagttcgaggcgtccaac
cgtcgcgtgctggccgagggtggcgagcccgcggccgggcgtcccgcgctcatgggcatc
accaaggcgtcgctggccaccgagtcctggctgtcggcggcctccttccaggagaccacc
cgggtgctcaccgacgcggcaatcaacgccaagtcggacaagctcgtgggcctgaaggag
aacgtgatcatcggcaagctgatcccggccggcaccggcatcgcccggtaccgggacatc
caggtgcagccgaccgaggaggcccgcgcggccgcctacacgctgccctcgttcgacgac
acctactacggggccgacaccttcggggtcgccaccggtgccgcggtgccgctggacgac
ttcgatctgggccgcgactaccgctga
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