Nakamurella multipartita: Namu_1172
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Entry
Namu_1172 CDS
T00991
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nml
Nakamurella multipartita
Pathway
nml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Namu_1172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nml03021
]
Namu_1172
03400 DNA repair and recombination proteins [BR:
nml03400
]
Namu_1172
Enzymes [BR:
nml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Namu_1172
Transcription machinery [BR:
nml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Namu_1172
DNA repair and recombination proteins [BR:
nml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Namu_1172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ACV77579
UniProt:
C8XCL4
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All DBs
Position
1288049..1289131
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AA seq
360 aa
AA seq
DB search
MLISQRPSLTEEPVADNRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRVDGVL
HEFTTVPGVKEDITELILNLKELVVSSEDDEPVTMYLRKQGPGDVTAADIAPPAGVTVHN
SDLKLATLTKKGKLEIELVVERGRGYVPASPNKVVGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDKLVLDVETKPSITPRDALASAGTTLVELFGLARELNVDAEGIEIGPSPAE
ADHIAAFGLPIEEMDLTVRSYNCLKREGIHTVGELVSRTEADLLDIRNFGQKSIDEVKIK
LAGMGLALKDSPAGFDPAAAALSYGDTDWNDDTDDSGYGSLAGLGGTPQDDTDYAETEQI
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctcccagcgccccagcttgaccgaggagccggtggccgacaaccggtcccgc
ttcatcatcgagccgctcgagcccggattcgggtacaccctgggcaactccctgcggcgc
accctgctgtcctccatccccggcgcgagcgtcaccagcatccgcgtcgacggcgtgctg
cacgagttcaccaccgtgcccggcgtcaaggaggacatcaccgagctgatcctgaacctc
aaggaactggtcgtctcctccgaggacgacgagccggtcaccatgtacctgcgcaagcag
ggccccggcgacgtcaccgccgccgacatcgccccgcccgccggcgtgaccgtgcataac
tcggatctgaagctggccaccctgaccaagaagggcaagctggagatcgagctggtcgtc
gagcgtggccgcggctacgtcccggcctcgccgaacaaggtcgtcggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctgaaggtcacctaccgggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctggtgctggacgtcgagaccaagccg
tcgatcaccccgcgggacgcgctggcctcggccggcaccaccctggtggagctgttcggg
ctggcccgcgagctcaacgtcgacgcggaaggcatcgagatcgggccgtcgcccgccgag
gccgaccacatcgccgcgttcgggctgccgatcgaggagatggacctgaccgtccgctcc
tacaactgcctcaagcgcgagggcatccacaccgtcggcgaactggtctcccggaccgag
gccgacctgctggacatccgcaacttcgggcagaagtcgatcgacgaggtcaagatcaag
ctcgccggcatgggcctggccctgaaggactcgccggccgggttcgatcccgccgccgcc
gcgctgtcctacggcgacaccgactggaacgacgacaccgacgacagcggctacggctcg
ctggccggcctcggtggcacgccccaggacgacaccgactacgccgagaccgagcagatc
tga
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