Nakamurella multipartita: Namu_2144
Help
Entry
Namu_2144 CDS
T00991
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nml
Nakamurella multipartita
Pathway
nml03420
Nucleotide excision repair
nml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Namu_2144
03430 Mismatch repair
Namu_2144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nml03400
]
Namu_2144
Enzymes [BR:
nml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Namu_2144
DNA repair and recombination proteins [BR:
nml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Namu_2144
MMR (mismatch excision repair)
Other MMR factors
Namu_2144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACV78522
UniProt:
C8XJ57
LinkDB
All DBs
Position
2365224..2368544
Genome browser
AA seq
1106 aa
AA seq
DB search
MISAIDLARELGLPAPTAEQAAVIEAPLEPGLVVAGAGSGKTETMAARVVYLIATGQVRP
EQVLGLTFTRKAAAALAQRIRQRLALLTTLRPRTGSGRSPADLPAGDPDVSTYHAFGGRL
IADFGPLAGIEPAARVLTPTGAWQLARRVVGRWDGDLLTDLGPDQVTERLLAISSALADH
LTDVDLLSDELATVLDRLRSAPPGPRQRAALHSGLAGPVKRLQDRQWILPLVAAYVRAKR
DRGVVDFADQMQIAATLVREHPRIGEAMRERYRVVLLDEYQDTGHAQRVILRSLFGDRDG
AGRAGGHGQARWGHPVTAVGDPVQSIYSWRGASASNLPRFVTDFPLASGRPSSIRSLLTS
FRNPGAVLALANEVSRPVRQGGRAVEVGELRPTPAADPGRLRYGLFGTAEQENAWLAEAI
AGYWRDALDEGGAGATPPTTAVLVRRRSDMADTADALRAAGLPVEVVGLGGLLDEPEVAD
LVATLRVLVDPTAGPAAMRLLTGARWQLGAADLEALAARARELAGPARPADGHGAGGPAD
PTAVVRSAVAAALPVEDIDTWSMVDAAGDLGPAQAYSAAGHRRLVRFAAHLARLRARLNQ
PLPDLIADLERACHLDVESLVAGTGRAHLDAFAAVVAEVAATGAGPAELLEYLDAAAERE
DGLTPGEVPQPSGRVQVLTVHAAKGLEWEIVAVPHLTEGVFPITRGSTWLGDPAQLPPQL
RGDRDDLPQLAWPAGGTQKDLADALAAHAAEFGELRLTEERRLLYVALTRAERTLLFSGH
HWGTGLAKPAGPSPFLEECAALARPFAEPDEWAPPPATDEGQQLLPRTAVWPIDPLGPRR
PHVQVGADRVLQALADLAAAEPEPVEDRPGTADEVDTGDPFGWAADVTTLLAERSDRGRE
VHEVELPGTITVTSLVELADDPAELARRLTRPVPTESSGRLSRGTDFHAWLEHRFRGEAL
LELSDLPGAGDAWVGADPEIEDLKRRFLASPWADRVPIDVEVPFASRIAGLGVRGRVDAI
FADADGGITVVDWKTGHSPLREDAAAVQLACYRLAIAQLHGLPLARVRAAFHYVRSGVTQ
SPANLLDADGIEALIARNTLDPVPPR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcgatcgacctggctcgcgagctcggcctgcccgcgccgacggccgaacag
gccgcggtgatcgaggcgccgctggagccggggctggtggtcgccggcgccgggtcgggc
aagaccgagacgatggccgcccgggtggtctacctgatcgcgaccggacaggtgcgcccc
gagcaggtgctgggactcaccttcacccgcaaggccgcggccgcactggcccaacgcatc
cgccagcgactggccctgctcaccaccctgcgcccgcggaccgggagcggccggtcaccg
gccgatctgcccgccggcgacccggacgtcagcacctaccacgccttcggcgggcggctg
atcgccgacttcgggccgttggccggcatcgaaccggcagcccgggtcctgacgccgacc
ggcgcctggcagttggcccggcgggtggtggggcgctgggacggtgacctgctcaccgac
ctgggtcccgatcaggtcaccgagcggctgctggcgatctcctccgcgctggccgatcac
ctgaccgacgtcgacctgctctccgacgagttggccaccgtgctggaccggttgcgctcg
gcgcctccgggtccccggcagcgggccgccctgcacagcgggttggccgggccggtgaag
cggctgcaggatcgccagtggatcctgccgttggtcgcggcctacgtccgggccaagcgt
gaccgcggggtggtcgacttcgccgaccagatgcagatcgccgccaccctggtccgggag
cacccacgcatcggcgaggcgatgcgtgagcgctaccgggtggtgctgctggacgagtac
caggacaccggccacgcgcagcgcgtcatcctgcggtcgctgttcggcgaccgggacggc
gcgggccgggccggcggtcatggtcaggcgcggtggggtcacccggtgaccgcggtcggc
gacccggtgcagtcgatctactcctggcgcggcgcgtcggcctccaacttgccgcggttc
gtcaccgacttcccgctcgcttcgggccgcccgtcgagcatccgctcgctgctgaccagc
ttccgcaacccgggtgcggtgctggccctggccaatgaggtgtcgcggccggtccggcag
gggggtcgggcggtcgaggtcggcgagttgcggccgaccccggccgcggacccgggacgg
ctgcggtacggcctgttcggcaccgcggagcaggagaacgcctggctggccgaggcgatc
gccggctactggcgtgacgcgctggacgagggcggggccggggcgacgccgccgaccacc
gccgtgctggtgcggcggcgcagcgacatggccgacaccgccgacgccctgcgcgccgcc
ggtctgccggtcgaggtggtcggtctgggtggcctgctcgacgagcccgaggtggccgac
ctggtggcgacattgcgggtgctggtcgatccgaccgccggcccggcggcgatgcggctg
ttgaccggcgcgcgctggcagttgggggcggccgacctggaggcgctggccgcgcgggcc
cgggaactggccggccccgcccggcctgccgacgggcacggtgccggcggaccggcggat
cccaccgcggtggtgcgttcggcagtggccgcggccttgccggtcgaggacatcgacacc
tggtcgatggtcgacgccgccggcgacctgggaccggcccaggcctactcggccgccggc
catcgccggctggtccggttcgccgcgcacctggcccggttgcgcgcccggctgaaccag
cccctgccggacctgatcgctgacctggaacgggcgtgccacctggacgtggagtcgctc
gtcgccggcacgggtcgggcccatctggacgcgttcgcggccgtggtcgccgaggttgcg
gccaccggagccgggccggccgagttgctggagtatctggatgcggccgccgagcgggag
gacggcctgacgccgggcgaggtacctcagccctccggccgggtccaggtgctgaccgtg
catgcggccaaggggctggagtgggagatcgtcgcggtcccgcacctgaccgaaggggtc
tttccgatcacccggggcagcacctggctgggcgatccggcgcagctgccgccgcagctc
cgcggagaccgggacgatctgccgcagctggcctggccggccggcggcacccagaaggat
ctggccgatgccctggccgcccatgccgccgagttcggtgagctcaggctgaccgaggag
cggcggctgctctacgtcgcgctcacccgggccgaacgaacgctgctcttctccgggcat
cactggggcacgggcctggccaaaccggccggacccagcccgttcctcgaagaatgcgcc
gcgttggcccggccgttcgccgagccggacgagtgggcgccgcctccggccaccgacgag
ggccagcagttgctgccgcggaccgcggtgtggcccatcgacccgctcggcccgcggcgg
ccgcacgttcaggtcggggccgatcgggtgctgcaggcgctggccgacctggccgcagcg
gagccggagcccgtcgaggaccggccgggcactgcggatgaggtggacactggtgatccg
ttcggctgggcggcggacgtgacgacgctgctggccgaacgatccgaccgggggcgagaa
gtgcacgaggtggaactgccggggacgatcaccgtgacctcgctggtggagctggccgac
gacccggccgaactggctcggcggttgacccgcccggtccccaccgagtcctccggtcgg
ctcagccgcggcaccgacttccacgcctggctcgagcaccggttccgcggcgaggcgctg
ttggagctgtccgacctgccgggcgcgggtgacgcctgggtcggcgcggacccggagatc
gaggatctcaagcgccggttcctggcctcgccgtgggccgaccgggtgccgatcgacgtc
gaggtgccgttcgccagccggatcgccgggttgggggtgcggggacgggtggacgcgatc
ttcgccgacgccgacggcgggatcaccgtggtcgattggaagaccggccattcgccgctg
cgcgaggacgcggccgccgtgcagctggcctgctaccggctggccatcgcccagctgcac
gggttgccgctggcccgggtcagggccgctttccactacgtgcgctccggggtgacccag
tccccggcgaacctgctcgacgcggacggtatcgaggcgctcatcgcccgcaacaccctt
gacccggtgccgccgcgatga
DBGET
integrated database retrieval system
