Nakamurella multipartita: Namu_2242
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Entry
Namu_2242 CDS
T00991
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nml
Nakamurella multipartita
Pathway
nml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Namu_2242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nml03019
]
Namu_2242
Messenger RNA biogenesis [BR:
nml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Namu_2242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Catalase_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ACV78619
UniProt:
C8XJF4
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All DBs
Position
2471761..2473503
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AA seq
580 aa
AA seq
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MSRSAGPGSNSPAGRPEQSAARVRKPAPPKPLAKDALRVVALGGIGEIGRNMTVYEFDGR
LLIVDCGVLFPEDGQPGVDLILPDLRLVEDRIDDIDAVVITHGHEDHIGALPWLLRLRPD
LPVLGARFSLALIAAKCREHRLTPTLQVVTEGERRKAGPFDLRFYAVNHSIPDALAVSIR
TPAGTVLHTGDIKLDQLPLDGRLTDLGGFARLGDKGVDLFLVDSTNAEVPGFVAPEREIG
PVMDSFIAKATQRVIVASFASHVHRVQQMLDSAYRHGRKVAFVGRSMVRNMQIAQELGLL
TVPDGLVRSLDKVLELPPDQVMLVSTGSQGEPLSALSRMSRGEHRQVNLTAGDTVILASS
MIPGNETSVFTIINELAKIGVTVVHQGVAKVHVSGHASAGELLYLYNAVKPRNVIPVHGE
WRHLRAQAKLAIATGVPEDRVILAPNGTVVDLVRGRASVVGHVEVGMVYVDGNAVGDVGD
NTLSDRLVLGEGGFISITVAIDSHTGRAIASPTISGRGFSDDPKALHAVVPLVEAELSRT
EADGVTDPHRVAQAVRRVVGRWVGDTYRRRPMIVPTVLAV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgctcggccggtcccggatccaactcaccggcgggtcggcccgagcagtcggcc
gcccgcgtgcgtaaaccggcccccccgaagccgttggccaaggatgccctgcgcgtggtc
gcgctcggcggcatcggcgagatcggccgcaacatgaccgtctacgagttcgacggccgg
ctgctgatcgtcgactgcggggtgctgttccccgaggacggccagcccggggtcgatctg
atcctgcccgatctgcggctggtcgaggatcgcatcgacgacatcgacgccgtggtgatc
acccacggccacgaggaccacatcggggccctgccctggctgctgcggctgcgaccggac
ctgcccgtgctgggtgcccggttctcgctcgcgctgatcgcggccaagtgccgcgagcac
cgtcttaccccgaccctgcaggtcgtcaccgagggcgagcggcgcaaggccggccccttc
gacctgcgcttctacgcggtcaaccactcgattccggacgcgctcgcggtgagcatccgg
accccggccggcacggtgctgcacaccggcgatatcaagctcgaccagctgccgctggac
ggtcggctgaccgacctgggcggcttcgcccggctcggcgacaagggtgttgacctgttc
ctggtcgactcgaccaacgccgaggtgcccggattcgtcgccccggaacgcgagatcggt
ccggtgatggactctttcatcgccaaggcgacccagcgggtgatcgtcgcctcgttcgcc
agccacgtgcaccgggtgcagcagatgctcgactcggcctaccggcacggccgcaaggtc
gccttcgtcggccggtcgatggtccgcaacatgcagatcgcgcaggaactgggcctgctc
accgtgccggacgggctggtgcgctcgctggacaaggtgctcgagctgccgccggaccag
gtcatgctggtctccaccggctcgcagggcgagccgctgtccgcgctgtcccggatgtcg
cggggcgagcaccggcaggtcaacctgaccgccggcgacaccgtcatcctggcctcgtcg
atgattccgggcaacgagaccagcgtgttcaccatcatcaacgagctggccaagatcggc
gtcaccgtggtgcaccagggcgtggccaaggtgcacgtgtccgggcatgcctcggccggc
gagctgctgtacctgtacaacgcggtcaagccccgcaacgtgatcccggtgcacggcgaa
tggcggcacctgcgtgcgcaggccaagctggcgatcgccaccggggtgcccgaggaccgg
gtcatcctggcccccaacggcaccgtggtcgacctggtgcgcggccgggcctcggtggtc
gggcacgtcgaggtcggcatggtctacgtggacggcaacgccgtcggcgacgtcggcgac
aacacgctctcggaccggctggtgctgggcgagggcgggttcatctccatcactgtggcc
atcgactcgcacaccgggcgggcgatcgcatccccgaccatctccgggcgcggcttctcc
gacgatccgaaggcgctgcacgcggtggtgccgctggtcgaggccgagctgtcgcggacc
gaggcggacggggtcaccgatccgcaccgggtggcgcaggcggtccggcgggtggtcggc
cgttgggtcggcgacacctaccggcggcggccaatgatcgtgcccaccgtgctggcggtc
tga
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