Nakamurella multipartita: Namu_2416
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Entry
Namu_2416 CDS
T00991
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nml
Nakamurella multipartita
Pathway
nml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Namu_2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nml03400
]
Namu_2416
Enzymes [BR:
nml01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Namu_2416
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Namu_2416
DNA repair and recombination proteins [BR:
nml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Namu_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
DUF6487
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ACV78790
UniProt:
C8X6D5
LinkDB
All DBs
Position
complement(2668090..2668956)
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AA seq
288 aa
AA seq
DB search
MPELPEVESARRVLADGALHRRIADVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGKS
MWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDREQ
FVDRGAYQRFAVTFADGGRMRLLDPRRLSRVRLDPDIQALGPDALGLSPTAFRTAMTAGR
RVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQLNRLGRAVQSALT
DAIARGGVHTGDVIAARKSGARCPRCGGAMVSGVVGGRTTWWCSKEQR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaggtcgagtccgcgcgccgggtgctggccgacggcgcactgcac
cgccgcatcgccgacgtggacgatcacgacgactacgtcacccgcccgttgacgccgggg
gcgctgcgctcggccctgatcggccggaccttcaccgccgcgcaccgccgcggcaaatcg
atgtggttgaccgtctccggcgaccgcgacgaccccaccgatcccgatgcttcgcccggc
gaccccgacctgggcatccacctgggcatgagcggcatcgtggtcgtcaccgggccgagc
gcacccgaggcgagcggcaccgacctggtcggcggtgactaccggcgggaccgcgagcag
ttcgtggatcgcggcgcgtaccagcggttcgcggtgaccttcgccgacgggggacggatg
cggctgctggacccgcgccggttgtcccgggtgcggctggatccggacatccaggccctg
gggccggacgccctggggttgtcgccgacggcattccggaccgcgatgaccgccggccgc
cgggtgtccacggccccggtcaaggcccggttgctggatcaatcggtgctggccggggtg
ggcaacctgctggccgacgaggcactgtggcgggccaagatcaacccgggccgcggggtg
gacaccctgtcgaccgcccagctgaaccggctcgggcgggcggtgcaatcggccctgacc
gatgccatcgcccggggcggcgtgcacaccggcgacgtcatcgccgcccggaagtcgggg
gcccgctgcccgcgctgcggcggcgcgatggtgtccggcgtcgtcgggggccggacgacc
tggtggtgcagcaaggagcagcggtag
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integrated database retrieval system
