Nakamurella multipartita: Namu_3908
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Entry
Namu_3908 CDS
T00991
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nml
Nakamurella multipartita
Pathway
nml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Namu_3908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nml03400
]
Namu_3908
Enzymes [BR:
nml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Namu_3908
DNA repair and recombination proteins [BR:
nml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Namu_3908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF3782
Motif
Other DBs
NCBI-ProteinID:
ACV80201
UniProt:
C8XGX0
LinkDB
All DBs
Position
complement(4311783..4315208)
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AA seq
1141 aa
AA seq
DB search
MGLHVHRAQRADALAAALGDLLAEPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGR
SDGICAAVRFPSPTTLVDELAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAEHLGY
RGDDAQAEHRRGRRYAVARRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADLSWQP
RLWRRLRDRIDAPDPVATFAQVAARLAADPGAVDLPERVSLFGATALPHRQVLLLSALAH
HRDVHLWLPHPSPVLWDRVGELRPPVPGRIRRRDDPTAGAATHPLLASMGRDVRELRTVL
AGRIDRDTWHRADDPPATLLGRLQRDLSDNRRPGPGMADKPVVDATDDSVRVHAAHGPGR
QVDVLRDVVIGLLADDPTLHPADILIMCPDIEAFAPLLQGAFGLADSVPDGHPAHQLQVR
LADRALRQTNPLLATLDRLLDLAGSRVTASDVLDFAAFAPVRHRFGFDDDELSTLADWVA
AAGARWGLDAEHRRRYGLAEYGQNTWRAALDRILLGVCMSDEPGNRLETALPLDEIGSAD
VDLAGRLAELIDRLATVVDTLSSRHSVQRWCAELLAGVQSLTSVPARAAWQVAEFRAEVA
AVQRHAAAAGSTGLELGLADVRALLAGALAGRPTRANFRTGTLTVCTMMPMRSVPHRVIC
LLGLDDGVFPRGAREDGDDLLIREPACGERDLRSQDRQLMLDAIVAATEKLVITYSGADE
RTGAQRPPAVPVGELLDALDDTATTATGGAVRDLVLVRHPLQPFDARTLTAGALGRVGPF
TFDPVALGGARALAGPRRPAGRLVPAPLPAPDRPPADVELAEVIEVLTHPAKGFLRRRLD
VAVPFEQDDPPDDLPVDLDALQEWGVGDRILRDRLAGVPEQECRQAEWRRGVLPPAALGG
RALERVLRDVRPLVDRTATLRAAPRHTVEVSVPLPDGRRLRGTVGGVHGIGLVTVSYSKL
APRARLQSWLAFLALTASDPALAWTAAAVGRAERGRPQCATLAALPGERARELLIDLVGL
YEEGLRAPLPLPLKTGEKYADARRRGMDHDKAQDQAAATWTGGKYPGERQDAANMRVWGR
DAPFSVLTGSGTDPDTGIDTGTDPGIDADTGTDRGTATGRFALLAGRLWRPLQQHEERGA
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctgcacgtgcaccgcgcccagcgcgccgatgccctggccgccgcgctgggtgac
ctgctggccgagccgccggccgacccgttcggcgtggacgtggtcgccgtgccgacccga
ggcgtggaacggtggctcacccagcggctcgcgcaccggctcggcacccgcgacggccgg
tccgacggcatctgcgccgccgtccggttccccagtcccaccacgctggtcgatgagctc
gccggcgaccgggccgacgatccctggacgccggacgccgcggtctggccgctgctggcc
gccatcgaggcatccgtgcacgaaccctggtgcgcgctgctggccgagcacctgggctac
cggggcgacgatgcccaggccgagcatcgccggggccgccggtatgcggtcgcccgccgg
atcgccggcctgttcgacgggtacgccgaacaccggccggagatggtggccgcctggtcg
cagggcggggacgacgacggctggggcgagccggtgccggcggacctgagctggcagccg
cggctgtggcggcggctgcgcgaccgcatcgacgcccccgacccggtggccacgttcgcg
caggtagcggcgcggctggcggccgatcccggggcggtggacctgcccgaacgggtcagc
ctgttcggcgcgaccgccctgccgcaccggcaggtcctgctgctgtccgcactggctcac
caccgggacgtgcacctgtggttgccgcatccctcgccggtgctgtgggaccgggtcggt
gagctgcgcccgcccgtcccgggccggatccggcgccgcgacgacccgacggccggcgcc
gccacgcacccgctgctggcctcgatgggccgcgacgtgcgggaactgcgcaccgtgctg
gccggccggatcgaccgggacacctggcatcgggccgacgatccaccggccaccctgctg
ggccggttgcagcgcgacctgagcgacaaccgccgcccgggaccgggcatggccgacaag
ccggtggtcgatgccaccgacgacagcgtccgggtgcacgcggcccacggcccgggccgt
caggtcgacgtgctgcgcgacgtggtgatcggcctgctggccgacgatcccaccctgcac
ccggccgacatcctgatcatgtgcccggacatcgaggcgttcgcgccgctgctgcagggt
gcgttcgggctggccgactcggtgccggatggccatccggcccatcagctgcaggttcgg
ttggccgaccgggcgctgcgccagacgaatccgctgctggccaccctggaccggctgttg
gacctggccggcagccgggtcaccgcctccgacgtgctggacttcgccgcgttcgcgccg
gtccggcaccggttcggcttcgacgacgacgaactgagcacgctggccgactgggtcgcc
gcggctggcgcccggtgggggctggacgccgagcaccgccgccggtacggcctggccgag
tacggacagaacacctggcgggcggcgctggaccggatcctgctcggcgtgtgcatgtcc
gacgagcccggcaaccggctcgagaccgcgctgccactggacgagatcggcagcgccgac
gtcgatctcgccggccggttggccgagttgatcgaccggctggccaccgtggtggacacc
ctgagcagccggcacagcgtgcagcggtggtgcgccgagctgctggccggagtgcagagc
ctgacctcggtgccggcgcgggcggcgtggcaggtggccgagttccgggccgaggtggcc
gccgtgcagcggcacgcggccgcggccggatcgaccggtctcgagctcgggctggccgac
gtccgggcgctgctggccggcgccctggccggccggcccactcgggccaacttccggacc
ggcacgctgaccgtgtgcaccatgatgccgatgcggtcggtgccgcaccgggtgatctgc
ctgctcgggctggacgacggggtcttcccgcggggcgcccgggaggacggcgacgacttg
ctcatccgagaacctgcctgcggggaaagggatctgcgttcccaggaccgccagctgatg
ctggacgcgatcgtcgcggcgaccgagaagctggtcatcacctactccggcgcggacgag
cgcaccggcgcccagcgtccgcccgcggtgccggtgggcgagctgctcgacgcgttggac
gacacggcgacgaccgccaccggcggcgccgtgcgggacctggtgctggtgcgccacccg
ttgcagccgttcgacgcgcggacactcacggcgggcgcgctcgggcgggtgggcccgttc
acctttgacccggtcgccctcggcggggctcgggcgctggcgggtccgcgccggccggcc
ggccggctggtccccgcgccgctgccggcccccgaccggccgccggccgacgtggaactg
gccgaggtgatcgaggtgctgactcacccggccaaggggttcctgcggcgccggctcgac
gtcgcggtgccgttcgagcaggacgatccgcccgacgacctgccggtcgatctggatgcg
ttgcaggagtggggggtcggtgaccggatcctgcgcgaccggctggccggggtgcccgag
caggagtgccggcaggccgagtggcgccgcggggtactgccgccggccgcgctgggcggc
cgggcgttggagcgggtgctgcgggacgtgcggccgctggtggaccggacggcgaccctg
cgggcggcgccccggcacacggtcgaggtctcggtgccgctgcccgacgggcgtcggctg
cgcggcaccgtcggcggggtgcacggcatcgggctggtcaccgtctcctacagcaagctc
gccccccgggcccggctccaatcctggctggcctttctcgcgctgaccgcgtccgacccc
gccctcgcctggactgcggcggccgtcggtcgggccgagcgtggccgcccgcagtgcgcc
accctggccgcgctgccgggcgagcgggcccgcgaactgctgatcgatctggtcggcctg
tacgaggagggcctgcgcgcgccgttgccgctgccgctcaagaccggtgagaagtacgcc
gacgcgcgccgccgcgggatggaccacgacaaggcgcaggaccaggccgccgccacctgg
accggcggcaagtacccgggcgagcggcaggacgcggccaacatgcgggtctggggccgt
gacgccccgttcagcgtgctgaccggatccggaacggaccccgacaccggcatcgacacc
ggcaccgaccccggcatcgacgccgacaccggcaccgatcgcgggacggcgaccggacgg
ttcgccctgctcgcgggccggttgtggcgcccgctgcagcagcacgaggaacggggcgcg
ctgtga
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