Nakamurella multipartita: Namu_4228
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Entry
Namu_4228 CDS
T00991
Name
(GenBank) conserved repeat domain protein
KO
K20276
large repetitive protein
Organism
nml
Nakamurella multipartita
Pathway
nml02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Namu_4228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
DUF11
SpaA_2
Motif
Other DBs
NCBI-ProteinID:
ACV80517
UniProt:
C8XIQ2
LinkDB
All DBs
Position
complement(4681552..4688739)
Genome browser
AA seq
2395 aa
AA seq
DB search
MGTVARRRTRRWGALATVVALVAGLLMVSATIAPAPPAHAATVAIGTIATQMANQQGVDA
GTSGNCIRYAPSSGTGSSSTSSAWVTNTVAGLPNSATTAHGYSTSCPTNLSTSSQSALGF
RPSTVTSAEDGMPFLIGGMTHYNNPIQANDQYFTGELRTQLGGFSGTTVTFNWTMNETPN
TGSGNCCNDITSFTNQISDVTLTQGGLTYRLVILGFVPAASATSCPATPAGNPVNEFSTV
EGAQTNACLYASLQQVRTLRIVKNVVGSPPGTPSFSYNSTSTLTGSAWANTTFSLASRGT
VERPLTSGSTVTVTEGDPADDRWSLTGLTCQQYNALGVLVDLPGTGNLAARRISLDPVPA
PLYPANPVVICTFTNTYTPRTTLTLVKSVTGAVVSPSLFTLTATGTASPTSGTVVSGASG
STAVTNQRIVAGTYQLTELGTGAAATGFVQVGSWTCARGSTTYPVSPTGVVTLPDLPAGS
AVGCTVVNRAATGTLRISKVVDDPQGGYVGGTGQSFAGAYTCGAGFSGSFSALTTAAAVT
VTGIPAGRACTVSENGPTGGLLNASFAWGTPSYSAQPVTITDQATADVTITNPVVQRLGS
FAVTKSIDGPGGYTGGVNRVFPVAYSCTLTNGPTSAGTLDLTAAQAVSPAAAIPAGSVCT
FSETLTAQAGDFGDPSYAWSGYTVTPTSVTIGDGATAQVGITNTYERDAGSLVLAKQIQG
DGYIGTGEPFTVQYTCGVASGQVTLAAGGSATVSVPARNTCTAAEVPPAADLLQPAYVWG
NATWSDGTSATNSVTVPANGTATLTVTNPTIPVFGRVQVGKQITGETAGVTAAASFQITV
SCSNAYTGAFTVGVGGTALTPDLPVGTSCSFSEATPTVGLLDSSYQWGTPVLPGPVTITA
PNQVPSVVVTNPVSRVYGDLEISKQLVDPSGRVDRQRQYTIDYDCSYAGVSAANGTVQLF
AGESTVIPDILLESRCTVVEDPTTLDAPPVADDTSWVWLPPTYDPGTSVLITSPDFPATV
TVTNRTNQLTGTFQLTKSVVGDGKALGYQPGSQFTFAVECTDGYESTVDLADGQSWTPDR
AIASGSSCTITETGKPDPLSPAFGWDDVEFGIGSSRVNGSITIRIPETATPIQVNAVNPI
TPRFGSLELTKQVTGQTAGLVPGTTFDVNVSCGPGDLFTVTLTEGEPRTLTGIPVGVSCT
VAELPPDPAGLVDASYGWGPATYDPGATVTIAQEGQQVEVAIVNPIVRVGAPVRVVKSLT
GGQGVIDPARTYPITWSCSYGGQQVAGGTLDAVVDPTGVVVDQDVPLTAQCTATEGDLGV
PSDDPAYRWLAPTVTGTTVTADGQNAVTVANALTRDTGEVVVHKTVTGASEGYLGTGADF
TMHGQCAVPGTDVPTRYADGTIANLGTVTIAPVSVGWTCSGFEDTPAQGLLADTSYAWGS
PIITGTPALTPPVGGTFTLAEAGARQDFFVENPVVRVRSTFQITKNVVDPFGALIPGTQF
SGTFSCRYGSDDPVTGNWTLTNGDTFTGPAVYLNSQCTVTENDLGTAGLPDASFDWAAPV
VGDPVTVVPGGTATITVTNTIERQYGGLEVGKVLDDPDGGVRPDTDFTGVWTCTLGAQTW
SDRWEVGAGAAATLFTPADARVPATAVCAIIEDTPDPARLLDGSYAWGDRTYTPESVILV
ADETAQLSVTNTVQRVYSGFDVAKAITGSVADDDLVPVDRVFTGTFSCQYGSDVPVTGPW
TASVATAWVQAGILVGSVCQVTEEVPPGAGGQPVTGDSSYIWGTPDLGSSVTVTPPTEAN
QTVTVTNPTERLFGRFTLTKAVTGATDGITDPQPFPVTYSCQPGDGPAITGSTALAAGQT
LTVGPDPGDDLQLFIPVSSICTLTEPLATMPPLRDSSWTWGDPGFTVVGDIPTAGPVTVP
CADPLLTPCLGERSVTVTIPRPQEDYPDPPSVGLDISNPVLTTDGSYAVSKSSDPASGTV
VAPGSTITYSVTVTSTGEVPVHDVVVTDDLSAVLPYAVIGSISDPAAVLDSQTQQLVWTV
GDVPGGQSRTLTYQATVNPGVAGVSITNQVTSTADVRPSSCAEPGDPVCTTTHRTPDRPT
ISKQVDGDPVFDPGPGTWTVPYAIVVTNPNPDTAITYSLTDNIAFPTDATIVSAAVTSAP
DGVSLFEPAWTGGDQTTIAQDVALPGGASHTYRVAVTATVPLTIDPARLACAATGSGGGS
GFFNIATLFALDSSAMADACAPVPVFLVVDKQWVIDGVTYRDGTQPLGYSATLTLDGVDR
VWRTVYWADQPGSTVDVGERAVVPASCTSASSGTGPVTLTAPLTSTVVTNVVTCVGPTPG
PTPGPTPGPVPPHPTPLPVTGFAVGSFLGWGLGLLLIGAAMIALAGWRPGRRRSA
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgtcgctcgacgcaggacgcgccggtggggggcgctggccacggtggtcgcc
ctggtcgcgggcctgctcatggtctccgcgacgatcgccccggccccgcccgcccacgcc
gcgacggtggccatcggcacgatcgccacccagatggccaaccagcagggcgtcgacgcc
ggcaccagcggtaactgcatccggtatgccccgtccagcggcaccgggtcctcgtccacc
tcctcggcctgggtcaccaacacggtggccggcctgcccaactcggcgaccacggcgcac
ggctacagcaccagctgcccgaccaacctgagcaccagcagccagagcgcgctgggcttc
cggccctccaccgtcacctcggccgaggacgggatgccctttctgatcggcggcatgacc
cactacaacaacccgatccaggcgaacgatcagtacttcaccggcgagctgcggacccag
ctgggcggtttcagcgggacgacggtgacgttcaactggacgatgaacgagacccccaac
accggatccggcaactgctgcaacgacatcacctcgttcaccaaccagatctccgacgtc
accctgacccagggcgggctcacctaccggctggtgatcctgggcttcgtgccggccgcc
agcgcgacgagctgcccggccacgccggccggcaatccggtcaacgagttctccaccgtc
gagggcgcccagaccaacgcctgcctgtacgcctcgctccagcaggtccgcacgctgcgg
atcgtcaagaacgtggtcggctcgccgccgggcactccttcgttcagctacaacagcacg
tcgacgctgaccggttcggcctgggccaacaccacgttctcgctggcctcccggggcacc
gtcgagcgacccttgacctccggcagcaccgtcaccgtgaccgagggcgacccggccgac
gaccgctggtcgttgaccggcctgacctgccagcagtacaacgcgctcggcgtgctggtc
gacctgcccggaaccggcaacctggccgcgcggcggatcagcctggacccggtcccggcc
ccgctgtatcccgcgaatccggtcgtcatctgcaccttcaccaacacctataccccgcgg
acgacgctgaccctggtcaagtccgtgaccggggccgtggtcagcccgtccctgttcacg
ctgaccgcgaccgggacggcgtcgccgaccagcggcaccgtggtctccggcgcctccggc
tcgacggccgtcaccaaccagcgcatcgtcgccggcacctaccagctcaccgagctcggc
accggggcggccgcaaccggcttcgtccaggtcggctcgtggacctgcgcccgcgggtcc
accacctatccggtcagccccaccggggtggtcaccctgccggatctgcccgccggcagt
gcggtcggctgcaccgtggtgaaccgggcggccaccggcacgctgcgcatcagcaaggtc
gtcgacgacccgcaaggcgggtacgtcggaggcaccggccagagttttgccggcgcctac
acctgcggcgccgggttcagcggcagcttcagcgccctgaccaccgcggcggcggtgacc
gtgaccggcatcccggccggccgggcctgcacggtcagcgagaacggcccgaccggcggc
ctgctcaacgcctcgttcgcctgggggaccccgtcgtactcggcccagccggtgaccatc
accgaccaggccaccgccgacgtcacgatcaccaacccggtggtgcagcggctgggcagc
ttcgccgtgaccaaatccatcgacgggcccggcgggtacaccgggggcgtcaaccgggtc
ttcccggtcgcgtactcctgcacgctgaccaacggcccgacgtcggcgggcacgctggac
ctgaccgcggcacaggccgtctccccggcggcggcgatcccggccggctcggtctgcacc
ttcagcgagaccctgaccgcgcaggccggggatttcggtgaccccagctacgcctggtcg
ggctacacggtgacgccgaccagcgtgacgatcggcgacggcgccaccgcccaggtcggc
atcaccaacacctacgagcgcgacgccggcagcctcgtgctggccaagcagatccagggc
gacggctacatcggcaccggcgagccgttcaccgtgcagtacacctgcggcgtggcctcc
ggccaggtgacgttggccgcgggcgggagcgcgacggtctccgtgccggcccgcaacacc
tgcacagcggccgaggtgccgcccgccgccgacctgctgcagccggcctacgtctggggc
aacgccacctggtccgacggcaccagcgcgaccaacagcgtgaccgtgccggccaacggc
accgccaccctgacggtgaccaacccgacgatcccggtcttcggccgggtccaggtcggc
aagcagatcaccggcgagaccgcgggggtcaccgccgcggccagcttccagatcaccgtc
tcctgcagcaacgcctacacaggcgccttcaccgtgggcgtcggcggaaccgcgctcacc
cccgacctgccggtgggcacgtcctgctcgttcagcgaggccaccccgaccgtcggcctg
ctcgactcgtcctaccagtggggcactcccgtgctgcccggaccggtgaccatcaccgcg
cccaaccaggtgcccagcgtcgtcgtcaccaacccggtcagccgggtgtacggggacctg
gagatcagcaagcagctggtggatccgagcggccgggtcgaccggcagcggcagtacacc
atcgactacgactgcagctacgcgggcgtgagcgcggccaacggcacggtccagctcttc
gccggcgagtcgacggtgatccccgacatcctgctggagtcccggtgcacggtggtcgag
gacccgaccaccctggacgcgccccccgtggccgacgacacctcctgggtgtggctgccg
ccgacctacgaccccggaacctcggtgctgatcacctcgcccgacttcccggccaccgtg
acggtgaccaaccggaccaaccagctgaccggcaccttccagctgaccaagtcggtggtc
ggtgacggcaaggccctgggctaccagccgggcagccagttcaccttcgcggtcgagtgc
accgacggctacgaatcgacggtcgacctggccgacggtcagagctggacgccggaccgg
gccatcgcgtccggaagctcctgcaccatcaccgaaaccggcaaacccgaccccctctcg
ccggccttcggctgggacgacgtcgagttcggcatcggcagcagccgggtcaacggatcg
atcaccatccggatccccgagacggccacgccgatccaggtcaacgcggtcaacccgatc
acgccccggttcggctcgctggagctgaccaagcaggtcaccgggcagaccgccggcctg
gtgcccggtaccactttcgacgtcaacgtcagctgcggccccggtgacctgttcaccgtc
accctcaccgagggtgagccgaggacgctgaccggcatcccggtcggggtcagctgcacc
gtggccgagctgccgcccgacccggccggccttgtggacgcctcctacggctggggcccg
gcgacctacgatccgggcgccaccgtgaccatcgcgcaggagggccagcaggtcgaggtc
gcgatcgtcaacccgatcgtccgggtcggcgcgccggtccgggtggtcaagtcgttgacc
ggcggccagggcgtcatcgatccggctcggacctatccgatcacctggtcctgcagctac
ggcggccagcaggtcgccggcggcaccctggacgcggtggtcgacccgaccggcgtcgtc
gtcgaccaggacgtgccgctgaccgcgcagtgcacggccaccgaaggcgatctgggcgtc
ccgtccgacgatccggcctaccgctggctggccccgaccgtcaccggcaccaccgtgacg
gcggacggccagaacgcggtcaccgtggccaacgcgctgacccgcgacaccggcgaggtc
gtggtgcacaagacggtcaccggggcgagcgagggctacctcggcaccggcgccgatttc
accatgcacggccagtgcgcggtgcccggaacggacgtcccgacccggtacgccgacggc
acgatcgccaatctcggcaccgtgacgatcgctccggtctcggtcggctggacctgctcc
ggcttcgaggacaccccggcgcagggcctgctcgccgacacctcctacgcctggggatca
cccatcatcaccgggacgccggcgttgaccccgccggtcgggggcaccttcaccctggcc
gaggccggcgcccggcaggacttcttcgtcgagaacccggtcgtccgggtgcgcagcacg
ttccagatcaccaagaacgtggtcgacccgttcggcgccctgatccccggcacgcagttc
agcgggacgttcagctgccggtacggctccgacgaccccgtcaccggaaactggaccctg
accaacggggacacgttcaccggcccggcggtctacctgaactcgcagtgcacggtcacc
gagaacgacctgggcaccgccggtctgcccgatgcctccttcgactgggcggcgccggtc
gtcggtgatccggtcaccgtggttcccggcgggaccgcgaccatcaccgtcaccaacacg
atcgagcggcagtacggcggcctggaggtcggcaaggtgctcgacgacccggacggcggg
gtccggccggacaccgacttcaccggcgtgtggacctgcaccctgggtgcgcagacctgg
agcgatcggtgggaggtcggcgcgggcgccgcggcgaccctgttcaccccggcggacgcc
cgggtaccggccacggccgtctgcgcgatcatcgaggacaccccggatccggcgcggctg
ctggacggctcctacgcctggggggaccggacgtacaccccggaatcggtcatcctggtc
gccgacgagaccgcgcagctgtccgtcaccaacaccgttcagcgggtgtattcgggcttc
gacgtggccaaggccatcaccggatcggtcgccgacgacgacctggtgccggtcgatcgg
gtgttcaccggcaccttctcctgccagtacggctcggacgtgccggtgaccggtccctgg
acggccagcgtggccacagcgtgggtgcaggccggcatcctggtcggctcggtctgccag
gtgaccgaggaggtgcccccgggggccggcgggcagccggtcaccggcgactcctcctac
atctggggcaccccggatctggggtcctcggtcaccgtgaccccgccgaccgaggcgaac
cagacggtcaccgtcaccaaccccacggagcggctgttcgggcgcttcaccctgaccaag
gcggtcaccggagccaccgacggcatcaccgacccgcagccgttcccggtgacctactcc
tgccagcccggggacggcccggcgatcaccggcagcaccgcgctggcggccggccagacg
ctgaccgtcggacctgacccgggtgacgatctgcagctgttcatcccggtgtccagcatc
tgcaccctgaccgagccgctggccacgatgccgccgctgcgcgacagctcctggacctgg
ggcgaccccgggttcaccgtggtcggcgacatccccacggccgggccggtcaccgtgccc
tgcgcggacccgctgctcaccccgtgcctgggtgagcggtcggtgacggtcaccatcccg
cggccgcaggaggactacccggatccgcccagcgtcggcctggacatcagcaacccggtg
ctgaccaccgacggttcctacgcggtcagcaagtccagcgacccggcgtcgggaacggtg
gtggccccggggtcgaccatcacctactcggtcacggtgacctcgaccggggaggtgccg
gtgcacgacgtcgtcgtcaccgacgacctgtcggcggtgctgccgtacgcggtgatcggg
tcgatctccgacccggccgcggtcctggactcgcagacccaacaactggtctggacggtc
ggcgacgtgcccggcgggcagagccggacgctgacctatcaggcgacggtcaaccccggg
gtcgccggggtcagcatcaccaaccaggtcaccagcaccgccgacgtgcgtccgagcagc
tgcgccgagccgggcgatccggtctgcacgacgacgcatcgcacgccggaccggcccacg
atcagcaagcaggtggacggggacccggtcttcgatcccggccccgggacctggaccgtg
ccgtacgcgatcgtggtgaccaaccccaacccggacaccgcgatcacctactcgctgacc
gacaacatcgccttccccaccgacgcgacgatcgtgtccgccgcggtgacctccgcgccg
gacggggtcagcctgttcgaaccggcctggaccggcggtgaccagacgacgatcgcccag
gacgtcgcgctgcccggcggcgccagccacacctaccgggtcgcggtgaccgcgaccgtg
ccgctcacgatcgacccggcccgcctggcctgcgcggcgaccggatcgggtggcgggtcc
gggttcttcaacatcgccacgctgttcgcgctggactcctcggccatggcagacgcctgc
gccccggtcccggtgttcctggtcgtcgacaagcagtgggtcatcgacggcgtcacctac
cgcgacggcacgcagccgctcgggtactcggcgacgctgaccctggacggcgtggaccgg
gtctggcgcaccgtgtactgggccgaccagccggggtcgacggtggacgtgggggagcgg
gccgtcgtacccgcgtcctgcacctccgcctcgtccgggaccggcccggtcacgctgacc
gcgccgctgacctcgaccgtggtcaccaacgtggtcacctgtgtcgggcccacccccgga
cccacgccgggtccgacgcccgggccggtcccgccgcatccgaccccgctgccggtgacc
ggcttcgcggtcgggtctttcctgggctggggcctgggcttgctgctgatcggggccgcg
atgatcgcgctggccggctggcgaccgggccggcgccggtcggcctga
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