Neisseria meningitidis M01-240149 (serogroup B): NMBM01240149_0713
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Entry
NMBM01240149_0713 CDS
T01930
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nmm
Neisseria meningitidis M01-240149 (serogroup B)
Pathway
nmm03030
DNA replication
nmm03430
Mismatch repair
nmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMBM01240149_0713
03430 Mismatch repair
NMBM01240149_0713
03440 Homologous recombination
NMBM01240149_0713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmm03032
]
NMBM01240149_0713
03400 DNA repair and recombination proteins [BR:
nmm03400
]
NMBM01240149_0713
Enzymes [BR:
nmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMBM01240149_0713
DNA replication proteins [BR:
nmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMBM01240149_0713
DNA repair and recombination proteins [BR:
nmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMBM01240149_0713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADY97304
LinkDB
All DBs
Position
820539..821951
Genome browser
AA seq
470 aa
AA seq
DB search
MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEVALVKFEQGRV
VRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELFSVLKGCVLVAHNSRFDYT
FLKHEFHRVGIGFSSPALCSVQLSRCLYPQFYKHSLDSIIERLGIVVEDRHRAMADVSAL
CDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLREQLYGLPDGMGVLACFDGGGKV
NYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFPALGSLHAYKIKAELVGRYHSGCYV
SAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFANKKAARRALSSWAETYG
LCPASAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLAFAHKLPILDWGKMHEVEITE
TDPLTGEKVVLHGMGGALEMGDGLWYFDKDLPDAFKAKFKTDRKNIKEIG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtttgaatttaaagagaataaaatgattgttgcttctcgctggcccttgctggaa
aaggtatttttacggtttggaatgccggttgccgtggttgatttggaatcgacgggcggc
aatctgtatgaagacagggtaaccgaagtggctttggtcaagtttgagcagggaagggtg
gtgaggcatgagtggttggttaatcctcaaaaaccgattccgcagtttgtggcggggctg
acggggatttcagacggcatggttgccgatgcgcctgtttttgcagagattgccggcgag
ttgttttcggtattgaagggttgtgtgctggttgcacataacagccgtttcgactatacg
tttttaaagcatgagtttcatcgtgtgggtatcggattttcatcgcctgctttgtgcagt
gtgcagctgtcccggtgtctgtatccgcaattttacaagcacagcctggacagtatcatc
gaaaggttggggattgttgtggaagacaggcatcgtgcgatggcggatgtatcggcattg
tgcgattatttggaatacagtctgtcggaacacggggtcgaggcatggatcaggcagtgt
ttccgtttgatgaatccgaaaccgttgcctgccgcgctgcccgaacggttgagggaacag
ttgtacggtttgcctgacggtatgggggtgctggcttgtttcgacggcggagggaaagta
aattacatcggtacgtttgaacgggtatatagcgaggtttcggctttattggattccgga
aaagccccgtttgattggtgcaatacggaggaagtccgtttttttcccgctttgggcagc
ctgcatgcatataagattaaagcggaattggtcgggcgttatcattcgggttgttatgta
tctgccaaaaatctgctgaaaacatttacgaccgtcaggtttgaaaaaggttcagacggc
atgttgaatgcgaaaacagcggctttgaaaaacggtgtgacggataatccgcctaccgga
ttatttgccaataaaaaggcggcgagacgggctttgtcgtcgtgggcggaaacatacgga
ttgtgtcctgcctcagccggtatccttccggacggttatgcagaggatgagccttgtccc
gtatatgtttcaggccgatgcgataaggcgtgcggccgttctgacgaacaggttttggcg
tttgcacacaagttgcctattttggattggggaaaaatgcatgaggtagaaattaccgaa
actgatcctttaacgggggaaaaagttgttctgcatggaatgggcggcgcattggaaatg
ggtgacgggctttggtatttcgataaagatttaccggatgcgtttaaggcgaagtttaaa
acggacaggaaaaatattaaggaaatcggttaa
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