Neisseria meningitidis 053442 (serogroup C): NMCC_1328
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Entry
NMCC_1328 CDS
T00633
Name
(GenBank) ATP-dependent RNA helicase, putative
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nmn
Neisseria meningitidis 053442 (serogroup C)
Pathway
nmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMCC_1328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmn03019
]
NMCC_1328
Enzymes [BR:
nmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMCC_1328
Messenger RNA biogenesis [BR:
nmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMCC_1328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
UvrD-helicase
AAA_22
Helicase_C_2
Nexin_C
Motif
Other DBs
NCBI-ProteinID:
ABX73500
LinkDB
All DBs
Position
1335093..1336466
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AA seq
457 aa
AA seq
DB search
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP
SLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMD
KQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQM
LPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLL
ERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL
RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKM
FESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQREKNTRPE
NAANDAGAACGKIAGRSRRSRREHRTCALLQPRYGVK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccattttcctctttaggtttgggtacggaactcgtttccgcactgaccgcg
caaggttacgaaaacccgacgcccatccaagccgccgccattcccaaagcactcgccggt
catgatttactagccgccgcgcaaaccggcacgggcaaaaccgccgcctttatgctgccc
tcgctcgaacgcctcaaacgttacgccaccgccagcacctcgcccgcgatgcaccccgtg
cgtatgctcgtgttgacccccacgcgcgaactcgccgaccaaatcgaccaaaacgtgcag
tcctacatcaaaaacctgccgctgcgccacaccgtcttgttcggcggtatgaatatggac
aaacagaccgccgatttgcgtgccggctgcgaaatcgtcgtcgccacagtcggacggctg
ctcgaccacgtgaaacagaaaaacatccatttgaacaaagtcgaaatcgtcgttttggac
gaagccgaccgtatgctggatatgggttttatcgacgacatccgcaaaatcatgcagatg
ctgccccgccaacgccaaaccctgctcttttccgccaccttctccgccccgatacgcaaa
ctggcgcaagacttcatgaacgcgcccgaaaccgtcgaagtcgccgcgcaaaacaccacc
aacgccaacgtcgagcagcacatcatcgccgtcgataccattcagaagcgcaacctgctc
gaacggctgattgtcgatttgcatatgaaccaggtcatcgtgttctgcaaaaccaaacaa
agcgtcgaccgcgtaacgcgcgaactggtgcgccgcaacctgtccgcacaggcgatacac
ggcgaccgttcccaacaaagccggctcgaaacactcaacgccttcaaagacggcaacctg
cgcgtcctcgtcgccaccgatatcgccgcgcgggggctggatattgccgaactgcccttc
gtcatcaattacgaaatgcccgcccagcccgaagactacgtccaccgcatcgggcgcacg
gggcgcgcgggcgcggacggcgtggcgatttccctgatggacgaatccgaacagaaaatg
tttgaatccattaaagagctgaccggcaacaagctgctcatcgagcgcatcgagggcttc
gagccgcaatggtgggaacagggcggcgcaaaaccggaaaaacccgaaatgcgcgaaccg
agacaacgcaaccgctacgaatccgccaaagcgcaacgcgaaaaaaacacccggccggaa
aatgcggcaaacgatgcgggcgcggcttgcggaaaaattgccggacgcagccgccgaagc
cgccgggaacaccggacgtgcgccctgctccaaccgcgttacggcgtaaaatag
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