Neisseria meningitidis 053442 (serogroup C): NMCC_1952
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Entry
NMCC_1952 CDS
T00633
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nmn
Neisseria meningitidis 053442 (serogroup C)
Pathway
nmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMCC_1952 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmn03019
]
NMCC_1952 (rne)
03009 Ribosome biogenesis [BR:
nmn03009
]
NMCC_1952 (rne)
Enzymes [BR:
nmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMCC_1952 (rne)
Messenger RNA biogenesis [BR:
nmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMCC_1952 (rne)
Ribosome biogenesis [BR:
nmn03009
]
Prokaryotic type
rRNA processing factors
NMCC_1952 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_Tnp_IS1
Motif
Other DBs
NCBI-ProteinID:
ABX74077
UniProt:
A9M3I4
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All DBs
Position
2002096..2004855
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AA seq
919 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAE
FMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRIIQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRHTSPAPTAA
PEKKTSWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQNPRRSKREG
SKVEVREVAGKTARQEARADTAETRNNGNRRRNERGDRAAERANEAEIQSRNVQPAATVA
DAAPSETEVQTGKRRRNGSRNERGQTAPETAAVAETAVQTAENTPSEPHTAEDKGSKPKS
ERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVHSAAAHVF
GETDANAPITVSIADPVAERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAE
AQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKP
SEVATVPAEEMIQVETRQG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttatttaacgcaacgcaggccgaagagctgcgcgttgccatcgtcgac
ggacaaaacctgctggatttggacatcgaaacgctgggcaaagaacagcgcaaaggcaat
atctacaaaggcatcattacccgcatcgagccgtcgctggaagcgtgtttcgtggattac
ggaaccgaccgccacggcttcttgccgtttaaagaagtctcccgctcatacttccaagac
tacgaaggcggacgcgcgcgcatccaagacgtgctcaaagaaggcatggaagtcatcgtc
caagtcgaaaaagacgagcgcggcaacaaaggcgccgcgctgaccaccttcatcagcctc
gccggacgctatctggtattgatgccgaacaacccgcgcggcggcggcgtatcccgccgt
atcgaaggtgaagagcgtcaagagttgaaagccgccatggcggaactcgacattccgaac
ggcatgagcatcatcgcccgtaccgccggcatcggccgcagcgcggaagagttggaatgg
gacttgaactacctcaaacaactctggcaggcgattgaagaagcaggaaaagcgcatcac
gacccctacctgctctttatggaaagctcgctgctgatccgagccatccgcgactatttc
cgccccgacatcggcgagattttggtggacaatcaagaagtttacgaccaagttgccgag
ttcatgagctacgtcatgccgggcaatataggccgtctgaaactctacgaagaccacacg
ccgctgttttcccgcttccaaatcgaacatcaaatcgaaagcgcgttttcgcgcagcgtc
agcctgccttccggcggcgcgatcgtgatcgaccacaccgaagccctcgtttccatcgac
gtgaactccgcacgcgccacacgcggcgcggacatcgaagacaccgcgttcaaaaccaat
atggaagccgccgaagaagtcgcccgacaaatgcgcctgcgcgacttgggcggtttggtc
gtcatcgacttcatcgatatggaaaaccccaaacaccagcgcgatgtggaaaacgtcctg
cgcgacgcgctcaaaaaagaccgcgcccgcgtgcagatgggcaaactgtcccgtttcgga
cttttagaattgagccgccaacgtttgaaaccggctttgggcgaaagcagccatgttgcg
tgtccgcgctgtgccggcaccggcgtgattcggggcatcgaatccaccgccctgcacgtt
ttgcgcatcattcaagaagaagcaatgaaagacaacaccggcgaagtgcgcgcacaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaa
gagcgtttggatgtcaacgtcgtcctgattccgaacatccacctcgaaaatccgcactac
gaaatcaaccgcatccgcaccgacgacgtagaagaagacggcgaaccgagctacaagcgc
gttgccgagccagaagaagacgaatccgccaaaccgttcggcggcgaaaaagccaaagcc
gcccgtcccgaacccgccgtcaaaggcgtgcgccacaccagccccgccccgactgccgcc
cccgagaaaaaaacctcctggtgggacagcttcaaagcttggctcaaacgcattttcggc
ggcagcgaaacccaagccgcacccgctgccgaaacctccgaaaaacgcagcacggcaaac
cgcagcggcagccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggc
agcaaagtagaagtccgcgaagtggcaggcaaaactgccagacaggaagcgcgtgccgac
acagccgaaacgcgcaacaacggcaaccgccgccgcaacgaacgcggcgaccgtgccgcc
gaacgtgccaacgaagcggaaatccaaagccgcaacgtacagcctgccgcaaccgttgca
gatgccgcaccgtccgaaaccgaagtgcaaaccggaaaacgccgccgcaacggcagccgc
aacgaacgcggccaaaccgcgccggaaaccgccgccgttgccgaaacagccgttcagaca
gcggaaaacacgccgtccgaaccgcataccgcagaagacaaaggcagcaagcccaaatcc
gaacgcaaccgccgcgaacgcgacagccgcgacgccaaagaacgccgcgagcgcaacaat
cagcgcgaccgccgtcaaaacggcaaaaaacgcaatattccgtctgccgccaaaatcgag
cagtacctgaatattcacgacaccgccgacaaagtccattccgccgccgcgcacgttttc
ggcgaaaccgacgcaaacgcgccgattaccgtcagcattgccgatccggttgcagaaagg
gatcttccgacagcatctcccgccgtttcaaacggcgacgcaccggtttatgatgcggcg
gaaaaaatccgccgtgccaccgccgccatcctgcccgaaggcgcgacaccgaaagccgaa
gcacaggaaatgccgtctgaaaccgcaacctttacggctgcggcggaacaggcacgggaa
accgcacaaaccggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgg
gcggcacaacccgaagtccaaaccggacgcggtttgcgccgttccgaacagcccaagccg
tctgaagtcgcaaccgtccctgccgaagaaatgatccaagtcgaaacccggcaaggctga
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