Natronomonas moolapensis: Nmlp_1052
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Entry
Nmlp_1052 CDS
T02478
Symbol
rtcB2
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nmo
Natronomonas moolapensis
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmo03016
]
Nmlp_1052 (rtcB2)
Enzymes [BR:
nmo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Nmlp_1052 (rtcB2)
Transfer RNA biogenesis [BR:
nmo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Nmlp_1052 (rtcB2)
Prokaryotic type
tRNA splicing ligases
Nmlp_1052 (rtcB2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CCQ35264
UniProt:
M1XN13
LinkDB
All DBs
Position
57614..59056
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AA seq
480 aa
AA seq
DB search
MIELEGTHTTARVLTDDEGLVEGNVLDQLEDLVDHPAFTEPIRMMPDAHVGAGAPVGFTM
PLGDRIVPNIVGVDVGCGMAAFELGDELPLSDADREAAVRNAVPMGRSVHAYDDAPHLVN
EFPFERATRVFERFDDAHAARFGERIDPGFDFDGYDSTYFNSLCGRVLADQRQGMGHVIK
SAGTLGGGNHFVEFARSRASGRYWLVVHSGSRYLGKSVAEFWQGRASDYRSADRIREAIP
DSDYEFLKFDPEAVGDRELHAWVTGGMGESHLRKKAIRAAFDGSEIERAFERLSRPTADV
ETRSDDLDYLEGREAHGYYVDMLFAQQYARWNRTLIGEAICSALGVEPIDSFQSIHNYID
FRDLTVRKGATPAREGQRVVVPLNMAEGSIIASGRGNDAYHRSAPHGAGRTMSRGEAFET
VEMAEFETAMAGVYSESVVDGVRDEAPMAYKPADAIADALEPTAAITDRLDPVHNLKSVE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaactcgaaggaacccacacgacggcacgggtgttgaccgacgacgaggggctc
gtcgaggggaacgtcctcgaccaactcgaggacctcgtcgaccaccctgcgttcaccgag
ccgatccggatgatgcccgacgcccacgtcggtgcgggggcgccggtcggctttacgatg
ccgctgggcgatcggatcgtcccgaacatcgtcggtgtcgacgtcggctgtgggatggcg
gcgttcgaactcggcgacgagttgccgctctcggacgccgaccgcgaggcggcggttcga
aacgccgttccgatgggacggtccgtccacgcctacgacgacgcgccgcacctcgtgaac
gagttccccttcgagcgcgctacccgcgtcttcgagcgtttcgacgacgcccacgcggcg
cggttcggcgaacggatcgaccccggattcgacttcgatggctacgacagtacgtacttc
aattcgctctgtgggcgcgtcctcgccgaccaacgacaggggatggggcacgtcatcaaa
agcgccggcacgctcggcggcggcaaccacttcgtcgagttcgcccgctcgcgggccagc
gggcgctactggctcgtcgtccacagcgggtcgcggtacctcggcaaatcggtcgcggag
ttctggcagggccgggccagcgactaccgctccgcggaccggatccgcgaggctatcccc
gactcggactacgagttcctgaagttcgaccccgaggccgtcggcgaccgcgaactccac
gcctgggtcaccggcggcatgggcgagtcccacctccgaaaaaaggcgatccgggcggcc
ttcgacgggagcgagatcgaacgggccttcgagcgcctctcgcggccgacggccgacgtc
gagacccggagcgacgacctcgattacctcgagggacgggaggctcacggctactacgtc
gacatgctgttcgcccagcagtacgcccgctggaaccgaacgctgatcggcgaggcgatc
tgttcggcgctcggcgtcgagccgatcgactcgtttcagtcgatccacaactacatcgac
ttccgagacttgactgtccgcaagggtgcgacgccggccagggaaggccagcgggtcgtc
gtcccgttgaacatggccgaggggtcgatcatcgcgtcggggcggggcaacgacgcctac
caccggagcgccccccacggtgccggccggacgatgagccgcggggaggccttcgagacg
gtcgagatggcggagttcgagaccgcgatggcaggcgtctactccgagtcggtcgtcgac
ggcgtccgcgacgaggccccgatggcgtacaaacccgccgacgccatcgccgacgcgctc
gaaccgaccgcggcgatcaccgatcggctcgatcccgtccacaacctcaaaagcgtcgag
tga
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